ggKbase home page

BSR_inoc_106910_5

Organism: BSR_inoc_Bacteroidetes_46_9

near complete RP 47 / 55 BSCG 48 / 51 MC: 1 ASCG 13 / 38
Location: comp(3707..4231)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4063922 bin=GWF2_Bacteroidetes_41_31 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 171.0
  • Bit_score: 246
  • Evalue 1.80e-62
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 167.0
  • Bit_score: 180
  • Evalue 2.60e-43
Tax=GWF2_Bacteroidetes_41_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 171.0
  • Bit_score: 246
  • Evalue 2.50e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Bacteroidetes_41_31_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGACATATCATTCCGAAAAGGAAATTATCGAAGGGTGCCTGAGAAGCGACAGAGCTGCGCAAAGGTTGCTTTACGACCAGTTCAAAACCCGGATGTACACCCTCGCTTACCGCATTACCGGCAACTTTGACGATGCCAACGATGTGCTTCAGGAAGGGTTTTTACAAATATTTAGAAACTTGCATGCTTTTAAAGGAGAAGCAAAATTGAGTTCCTGGATTCACACCATCATCGCCCGTGCAGCCATCCGTAAAATTAAAGAGCGAATTTATTTCGAAGATATCGAAAGTACTGATACTTCCACCATTATTGATTGGGGTACTGCCATCGACATCGACTACCTCGAAAAAGCTATCGCGAATTTGCCGGAGGGCTATCGTACCATTTTTACACTCTACGAAATCGAAGGTTTCAAACATCGCGAGATAGCAGAACTGATGGATATTTCGGAGAACACTTCTAAATCTCAGCTTTTTAAAGCTAAAAAAATGTTGCGTGAAAACCTTCAAAAACTGGTCAACTGA
PROTEIN sequence
Length: 175
MTYHSEKEIIEGCLRSDRAAQRLLYDQFKTRMYTLAYRITGNFDDANDVLQEGFLQIFRNLHAFKGEAKLSSWIHTIIARAAIRKIKERIYFEDIESTDTSTIIDWGTAIDIDYLEKAIANLPEGYRTIFTLYEIEGFKHREIAELMDISENTSKSQLFKAKKMLRENLQKLVN*