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BSR_inoc_Firmicutes_35_7

In projects: BSR_inoc  |  Biological_sulphate_reduction_analysis

Consensus taxonomy: Firmicutes  →  Bacteria

Metagenomic Context

Parent: BSR_inoc_UNK

Properties

Avg. coverage: 6.70 Longest contig: 25.88 Kbp Bin length: 1.63 Mbp GC content: 34.54 %
Contigs count: 609 Features count: 2108 rRNAs count: 0 tRNAs count: 44

Genome completeness

near complete RP 48 / 55 MC: 4 BSCG 50 / 51 MC: 8 ASCG 14 / 38 MC: 3
Displaying items 401-450 of 609 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
BSR_inoc_73164
Species: Holdemania filiformis (50%)
2 2416 bp 33.73 5.90 100.08
BSR_inoc_139979 2 1130 bp 26.81 4.25 100.89
BSR_inoc_214195
Species: Eubacterium dolichum CAG:375 (50%)
2 1129 bp 34.90 5.05 99.91
BSR_inoc_175945
Species: Holdemania filiformis (50%)
2 1219 bp 32.08 5.29 92.53
BSR_inoc_130243
Species: Acetohalobium arabaticum (50%)
2 1663 bp 35.96 3.70 99.94
BSR_inoc_2225
Species: Holdemania filiformis (50%)
2 1402 bp 32.60 5.88 68.90
BSR_inoc_232737
Species: Peptoclostridium difficile (50%)
2 1218 bp 28.74 3.82 76.35
BSR_inoc_219937
Species: Eubacterium dolichum CAG:375 (50%)
2 1349 bp 33.95 3.22 97.85
BSR_inoc_95793
Species: Holdemania filiformis (50%)
2 1209 bp 31.27 5.09 85.36
BSR_inoc_100277
Species: Acinetobacter sp. NBRC 100985 (100%)
2 1231 bp 32.66 4.63 96.99
BSR_inoc_223378
Species: [Clostridium] stercorarium (50%)
2 1697 bp 32.23 5.22 97.94
BSR_inoc_145676
Species: Clostridium sp. ASBs410 (50%)
2 1417 bp 33.24 6.56 99.08
BSR_inoc_13912
Species: Dysgonomonas gadei (50%)
2 1119 bp 31.81 3.35 99.46
BSR_inoc_192401
Species: Acinetobacter sp. MII (50%)
2 1243 bp 35.24 5.07 82.06
BSR_inoc_195700
Species: Desulfosporosinus youngiae (50%)
2 1094 bp 29.89 5.35 100.37
BSR_inoc_90060
Species: Erysipelotrichaceae bacterium 5_2_54FAA (50%)
2 2343 bp 32.95 5.70 101.54
BSR_inoc_125092
Species: Thermoanaerobacter sp. X514 (50%)
2 3007 bp 34.02 3.69 97.37
BSR_inoc_48961
Species: GWF2_Firmicutes_51_9_curated (50%)
2 1449 bp 34.16 4.97 97.52
BSR_inoc_8598
Species: Dickeya solani (50%)
2 1667 bp 37.25 6.30 71.09
BSR_inoc_215697
Species: Helicobacter sanguini (50%)
2 1051 bp 30.83 4.00 100.19
BSR_inoc_40260
Species: Alkaliphilus metalliredigens (50%)
2 1715 bp 33.99 5.34 46.01
BSR_inoc_41317
Species: Holdemania filiformis (50%)
2 1509 bp 32.14 4.37 99.60
BSR_inoc_98955
Species: Acinetobacter venetianus (100%)
2 1841 bp 32.16 4.81 93.70
BSR_inoc_115624
Species: GWF2_Firmicutes_51_9_curated (100%)
2 1783 bp 36.01 5.22 99.44
BSR_inoc_230917
Species: Acinetobacter sp. NBRC 100985 (50%)
2 1830 bp 38.63 3.93 79.34
BSR_inoc_222123
Species: Lactococcus lactis (50%)
2 1381 bp 31.21 4.24 97.97
BSR_inoc_101776
Species: [Clostridium] innocuum (50%)
2 1051 bp 30.16 4.00 100.76
BSR_inoc_36287
Species: Porphyromonadaceae bacterium ING2-E5B (50%)
2 1438 bp 39.99 4.38 99.30
BSR_inoc_50221
Species: Halanaerobium hydrogeniformans (50%)
2 1590 bp 34.09 5.09 96.79
BSR_inoc_60147
Species: Holdemania filiformis (50%)
2 1464 bp 33.74 5.74 71.72
BSR_inoc_55539
Species: Firmicutes bacterium CAG:536 (50%)
2 1129 bp 36.58 5.31 100.97
BSR_inoc_97168
Species: Ruminococcus sp. CAG:563 (50%)
2 1003 bp 33.70 6.28 98.70
BSR_inoc_214327
Species: BJP_IG2102_Acholeplasmatales_34_18 (50%)
2 1098 bp 31.97 3.28 99.73
BSR_inoc_75897
Species: Lactobacillus helveticus (50%)
2 1912 bp 34.62 4.63 100.11
BSR_inoc_201041
Species: Viridibacillus arenosi (50%)
2 1974 bp 35.71 5.09 99.24
BSR_inoc_77600
Species: GWF2_Firmicutes_51_9_curated (50%)
2 1629 bp 33.39 5.25 96.50
BSR_inoc_205705
Species: Fusobacterium necrophorum (50%)
2 1074 bp 33.80 3.77 83.80
BSR_inoc_150055
Species: Thermoanaerobacterium thermosaccharolyticum (50%)
2 1003 bp 30.41 5.08 100.50
BSR_inoc_25356
Species: BJP_IG2103_Clostridiales_50_15 (50%)
2 1986 bp 33.33 6.95 96.07
BSR_inoc_58869
Species: Pleurocapsa minor (50%)
2 1206 bp 37.06 2.86 99.01
BSR_inoc_159084
Species: BJP_IG2102_Acholeplasmatales_34_18 (50%)
2 1844 bp 30.31 13.58 89.32
BSR_inoc_226221 2 1333 bp 29.41 4.28 55.59
BSR_inoc_120843
Species: Holdemania filiformis (100%)
2 1716 bp 29.37 3.58 80.42
BSR_inoc_105834
Species: GWF2_Firmicutes_51_9_curated (100%)
2 2692 bp 32.84 4.57 90.27
BSR_inoc_24189
Species: Methanothermus fervidus (50%)
2 1209 bp 35.81 3.23 99.50
BSR_inoc_30550
Species: Eubacterium sp. CAG:180 (50%)
2 1735 bp 34.18 6.22 97.52
BSR_inoc_211761
Species: Marinobacter sp. ELB17 (50%)
2 1155 bp 36.45 4.16 91.17
BSR_inoc_170794
Species: Thermoanaerobacterium saccharolyticum (50%)
2 2004 bp 37.28 6.21 99.25
BSR_inoc_64523
Species: GWF2_Firmicutes_51_9_curated (50%)
2 1278 bp 33.18 4.11 98.83
BSR_inoc_3805
Species: Clostridium sp. CAG:122 (50%)
2 1010 bp 32.48 4.90 84.95
Displaying items 401-450 of 609 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.