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BSR_inoc_10082

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_10082_1
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..1252)
DNA (1251bp) protein (417aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
ATP synthase subunit alpha n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DP35_9FIRM
ATP synthase F1 subunit alpha
BSR_inoc_10082_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1249..1788)
DNA (540bp) protein (180aa)
ATP synthase subunit delta n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4L5_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ATP synthase F1 subunit delta
BSR_inoc_10082_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1788..2327)
DNA (540bp) protein (180aa)
ATP synthase subunit b n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAU5_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ATP synthase F0 subunit beta
BSR_inoc_10082_4
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

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comp(2394..2666)
DNA (273bp) protein (91aa)
ATP synthase subunit C n=1 Tax=Fusobacterium sp. CAG:649 RepID=R5WXN6_9FUSO
atpE; ATP synthase subunit c
ATP synthase subunit c {ECO:0000313|EMBL:AIO17952.1}; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
BSR_inoc_10082_5
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2699..3439)
DNA (741bp) protein (247aa)
atpB; F0F1 ATPase subunit A AtpB (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DPH9_9FIRM
ATP synthase subunit a {ECO:0000256|RuleBase:RU000483}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
BSR_inoc_10082_6
unknown

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comp(3429..3794)
DNA (366bp) protein (122aa)

This feature has no annotations

BSR_inoc_10082_7
unknown

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comp(3791..3997)
DNA (207bp) protein (69aa)
BSR_inoc_10082_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(3994..4614)
DNA (621bp) protein (207aa)
Uracil phosphoribosyltransferase id=3668760 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
upp; uracil phosphoribosyltransferase
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_10082_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4636..5862)
DNA (1227bp) protein (409aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Serine hydroxymethyltransferase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAG1_9FIRM
glyA; glycine hydroxymethyltransferase
BSR_inoc_10082_10
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5859..6926)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9DX76_CLOK1
ribose-5-phosphate isomerase B
Uncharacterized protein {ECO:0000313|EMBL:BAH08319.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
BSR_inoc_10082_11
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(6998..7852)
DNA (855bp) protein (285aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1028490 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus pentosus MP-10.;"
Release factor glutamine methyltransferase n=1 Tax=Lactobacillus pentosus MP-10 RepID=F6IWP0_LACPE
hypothetical protein
BSR_inoc_10082_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7849..8925)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBP4_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
prfA; Peptide chain release factor 1
BSR_inoc_10082_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9007..10401)
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5D6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF68811.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
multi antimicrobial extrusion protein MatE
BSR_inoc_10082_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10405..11001)
DNA (597bp) protein (199aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Thymidine kinase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG48_9FIRM
tdk; thymidine kinase
Displaying 14 items

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