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BSR_inoc_107358_8

Organism: BSR_inoc_Firmicutes_43_6

near complete RP 41 / 55 MC: 2 BSCG 43 / 51 MC: 3 ASCG 11 / 38
Location: comp(7626..11054)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 1158.0
  • Bit_score: 1014
  • Evalue 9.90e-293
Transcription-repair-coupling factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 1158.0
  • Bit_score: 1014
  • Evalue 7.00e-293
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 1118.0
  • Bit_score: 860
  • Evalue 4.80e-247

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Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3429
ATGAAAGCTTTGATTGAACGACTGCAATCCACTCCGGCCGTGGAGGCATTTTTCACCCCTCACCAAACGGTGGTATGCAGCGAAACCATGGAAGAAGCTTTGTTGCTGGCTGCCGCCTATCGCAAACATCCCGAGCCCATGATTGTGGTAAAAAGCAATCTTTATGCCGCCCAAAGACTCCATGATCGTTTGCAAACTCTTTTGGGGGACCACGAGTGTTTGCTTTTTCCTGCGGATGAATCCTTTCGCATTGAAGCATTAGCAAGTTCGCCGGAGATGGTGGTTCAACGCGTCTTTGTACTCAGCCAATTGCGTCAAGGCTATACTGGAATTGTCATTACTCATACAGCAGCCGTGGTGCGCTATCTCGCACCCGTTGCTCGTTTTGATGCCGCTACCCAATCCTTGAAAGTCGGACAAACCATCGCTCGCGACACGTTGTTGTACACCTTACATGCCATTGGCTACGAACGAAGCAACAAGATTGAACATTCGTTACAATATGCCGTTCGTGGAAGTGTTTTGGATATCTTTAGCGTAAATCAAGAAGCCCCCCTTCGGATTGAATTCTTCGGTGATACGATTGAAAGTCTCCGTTTTTTTGAACTAGGGACCCAACGGACGACTGCGGTTGTGGACACCGCAGAAATTATTGCCGCGAGTGACCTACTTTTGAACGGAGAGATGGAAGTTTTTGAAGCCTTATATGAGGATGAATCCAATCAAGCCAATTCGTTCTTATCCCAGTTGGACGACCATTCTTTACTGGGGCGCTATGCCTTCCTGTACAAGCATTATGAAGACCTGGTGTATACGCCCGCCTCTTTATTGGATTATGCACCTCAGGCGCGTTTAGTTCTGAGTGACTTCTCGCGAATTGAAGCCACGCAACAACGGATGGTTGAAGAACAATACGATTATTTTGTGGAACGTAATGAATCCATCCGGACCCTGCAACATCCGGTAGAGATTCTACGAAAAATGTCGGATCGACCCCGCTCTTTCGTGGAAGAATTCCATAGCAACCCCAATGCCATTGTCTTTCATTCTCGCAGTACGGAAGCAGGGCTTGGAAGCTCAAGACGCAATCATCAAATATTAGAAACCTACCGACAAGAAGGCAGAAAGATTGTTTTGTGTTATGAAAATGACCATCAAAAAAATAGTGTGATGGATTGGCTCAAGGAGTGGGAGTGGAACGCGGAGCCCTTGGATATTCATGTTTGGCCGACACACCCCATTTCTCTTGCTGCCTTTGGGTTACCCGAAGGGTTTGAACTTCCCGATTTGAACGTGGTCTATTTCAGTGCTCGCGAACTATTTGGGGCTGCCTTAAAGCCCGGAAAGAATTTCTCGCGCTATCGCGATGGTACGGCACTAACGAGTGCTGATCATCTGCAAGAGGGCGATTATGTGGTTCATGAACATCATGGAATCGGCCAATACCTCGGCCTGGTGACTTTGGAAAATGATGGCATTCATCGCGATTACTTGCACCTTGCCTATCGAGGGAAAGATGTTTTGTACGTTCCGTTGGAGCAATTCCGTTTGGTCCGTAAATATGTGTCCAAAGAGGGTGTTGTTCCCAAACTGAATAAGTTAGGCAGTGAAGAATGGCTGAAGACGAAGAAGCGCATCAAAACCAAGATTAGTGACATTGCCGAACGCTTGTTGACGTTGTATCGTGAACGAGTGAGTGTTTCTGGTTTTGCGTTTCCTCCCGATGATGAATGGCAACGACAATTCGAACAAGAATTTCCCTACGAACTCACCGAAGATCAACTGCGTAGTTTAGCTGAAATTAAAGTGGATATGGAACAGCCTTATCCGATGGATCGTTTGCTCTGTGGCGATGTTGGGTTTGGAAAAACAGAAGTTGCCTTTTTGGCAGCATTCAAAGCCATTCTAGGAGGCAAGCAGGTCGCATTTTTATGCCCAACGACCTTACTTGCCCGTCAGCATTATGAGACGGCCAAACAACGCTTTCAAAACGTTCCCATTGGCATCGGGATGTTAAGTCGATTCGTTCCCCCTGCCGTTCAGAAAAAGACCTTGAGTGAACTTAAAGAAGGGCGACTGTCAATGCTCATTGGAACCCATCGTTTATTGTCGAATGACCTAGTATTTCGTGATTTAGGGTTGCTGATTGTGGATGAAGAACAACGCTTTGGCGTGGAGCATAAAGAAAAAATCAAAGAACTAAAACGAAACATTGATGTGTTAACATTAAGTGCTACCCCCATTCCTCGCACCATGCAAATGGCGTTGCTTGGGGTTCGCAATCTCTCACAAATTGAAACTCCACCGCTCCACCGCTTACCGGTTCAAACATATGTCATGGAGAAAAACCCTCGCTTAATCAAAGAAGTTATTGAACGAGAACTCGGACGTGGTGGGCAAGTCTTTTACCTTTGTAATGAGATTGATGCGCTGCCAGGCATTGCCGCGACCCTGCAAAAACAAATTCCAGGAGCCAACATTATTATCATTCATGGGCAAATGGATCGGGATGATATTGAGGATGCGATGATTCGCTTCCAAGCAGGTGAAGCCAATGTCATGGTTTGTACGACCATCATTGAAAATGGGATTGATATCCCCAACGCGAATACCATTGTCGTGGATCGAGCTGACACCTTTGGATTGGCTCAACTCTATCAGATTAAAGGACGGGTAGGACGTAGCGACCGTCTTGCCTATGCGTATCTTTTGTATCGCCCACGCAAGCAGCTCAGCGAAGTAGCCATTAAACGCTTACGTTCCATCAAAGAGTTTGTGGAACTTGGGAGTGGCTATCGCATTGCGATGCGTGATCTTTCGATTCGAGGCGCTGGTGATATTCTTGGTGCCGAACAAGCAGGTTTCATTGATACCGTTGGGATTGACTTGTATCTTCAATTGCTTCAAGAAACCATCGAAGAAAAGCGGACGGGAATTCCAACTCCAGAGCCTGAAGTCCCACGTCCTTTACAAGTCGATGCGTACATTCCAAAGCCTTATACCAATGATGACTTGGATAAGATTGAATTGTATAAGAAAATCGATGCTATTCAAGATTTGGAAGGCTTATCAACGCTACAAGAAATGATGCGAGATGTGTATGGTAAACTCCCACTGAGTGTGGAGTTGTTACTTGAAAAACGTCGTTTAGAGCTTACGCTTCGCAACGAGTTGGTGGAAGAAGTCAAAGATAGTGCCAACGCATATGAAATTGTATTTACTCCGACGTTTTCTTCCTATGATGGGGTTGGAATTGATTTGTTTCGCATTGCCAATCAATTATCCAATCACCTGCTTCTTTCCTATCGCGGAGGAAGGATTCGTATGAAACTGCATAAGGAAGAACCTGAATGGTTAAAACTTGCCAGCCGTTTTTTGGAAAAGACATGGCAATTGGTGCAACGCTACCAAACAGGACAACCTCATTAA
PROTEIN sequence
Length: 1143
MKALIERLQSTPAVEAFFTPHQTVVCSETMEEALLLAAAYRKHPEPMIVVKSNLYAAQRLHDRLQTLLGDHECLLFPADESFRIEALASSPEMVVQRVFVLSQLRQGYTGIVITHTAAVVRYLAPVARFDAATQSLKVGQTIARDTLLYTLHAIGYERSNKIEHSLQYAVRGSVLDIFSVNQEAPLRIEFFGDTIESLRFFELGTQRTTAVVDTAEIIAASDLLLNGEMEVFEALYEDESNQANSFLSQLDDHSLLGRYAFLYKHYEDLVYTPASLLDYAPQARLVLSDFSRIEATQQRMVEEQYDYFVERNESIRTLQHPVEILRKMSDRPRSFVEEFHSNPNAIVFHSRSTEAGLGSSRRNHQILETYRQEGRKIVLCYENDHQKNSVMDWLKEWEWNAEPLDIHVWPTHPISLAAFGLPEGFELPDLNVVYFSARELFGAALKPGKNFSRYRDGTALTSADHLQEGDYVVHEHHGIGQYLGLVTLENDGIHRDYLHLAYRGKDVLYVPLEQFRLVRKYVSKEGVVPKLNKLGSEEWLKTKKRIKTKISDIAERLLTLYRERVSVSGFAFPPDDEWQRQFEQEFPYELTEDQLRSLAEIKVDMEQPYPMDRLLCGDVGFGKTEVAFLAAFKAILGGKQVAFLCPTTLLARQHYETAKQRFQNVPIGIGMLSRFVPPAVQKKTLSELKEGRLSMLIGTHRLLSNDLVFRDLGLLIVDEEQRFGVEHKEKIKELKRNIDVLTLSATPIPRTMQMALLGVRNLSQIETPPLHRLPVQTYVMEKNPRLIKEVIERELGRGGQVFYLCNEIDALPGIAATLQKQIPGANIIIIHGQMDRDDIEDAMIRFQAGEANVMVCTTIIENGIDIPNANTIVVDRADTFGLAQLYQIKGRVGRSDRLAYAYLLYRPRKQLSEVAIKRLRSIKEFVELGSGYRIAMRDLSIRGAGDILGAEQAGFIDTVGIDLYLQLLQETIEEKRTGIPTPEPEVPRPLQVDAYIPKPYTNDDLDKIELYKKIDAIQDLEGLSTLQEMMRDVYGKLPLSVELLLEKRRLELTLRNELVEEVKDSANAYEIVFTPTFSSYDGVGIDLFRIANQLSNHLLLSYRGGRIRMKLHKEEPEWLKLASRFLEKTWQLVQRYQTGQPH*