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BSR_inoc_112801

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_112801_1
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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279..662
DNA (384bp) protein (128aa)
30S ribosomal protein S8 n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q620_9DELT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
rpsH; 30S ribosomal protein S8
BSR_inoc_112801_2
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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690..1229
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVW0_DESFR
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
rplF; 50S ribosomal protein L6
BSR_inoc_112801_3
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1239..1598
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Desulfovibrio RepID=G7Q9V4_9DELT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
50S ribosomal protein L18
BSR_inoc_112801_4
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1619..2110
DNA (492bp) protein (164aa)
30S ribosomal protein S5 n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XLZ0_DESMR
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_112801_5
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2113..2295
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GPZ3_9DELT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
rpmD; 50S ribosomal protein L30
BSR_inoc_112801_6
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2292..2765
DNA (474bp) protein (158aa)
50S ribosomal protein L15 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVW4_DESFR
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
rplO; 50S ribosomal protein L15
BSR_inoc_112801_7
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2780..4099
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FKD0_9DELT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
secY; preprotein translocase subunit SecY
BSR_inoc_112801_8
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4096..4863
DNA (768bp) protein (256aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Methionine aminopeptidase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q9V9_9DELT
map; methionine aminopeptidase
BSR_inoc_112801_9
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5034..5405
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q612_9DELT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
rpsM; 30S ribosomal protein S13
BSR_inoc_112801_10
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5477..5863
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=2 Tax=Desulfovibrio magneticus RepID=RS11_DESMR
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
BSR_inoc_112801_11
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5971..6597
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVW9_DESFR
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
rpsD; 30S ribosomal protein S4
BSR_inoc_112801_12
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6631..7674
DNA (1044bp) protein (348aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Desulfovibrio RepID=G7Q9W4_9DELT
rpoA; DNA-directed RNA polymerase subunit alpha
BSR_inoc_112801_13
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7664..8101
DNA (438bp) protein (146aa)
50S ribosomal protein L17 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVX1_DESFR
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
rplQ; 50S ribosomal protein L17
BSR_inoc_112801_14
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8184..9098
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVX2_DESFR
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFL51610.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
LysR family transcriptional regulator
BSR_inoc_112801_15
unknown

Not on your lists

comp(9136..11322)
DNA (2187bp) protein (729aa)

This feature has no annotations

BSR_inoc_112801_16
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11921..12481)
DNA (561bp) protein (187aa)
Flagellin domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UBY8_9DELT
Flagellin domain protein {ECO:0000313|EMBL:EPR31409.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
flagellin domain-containing protein
Displaying 16 items

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