ggKbase home page

BSR_inoc_157572_1

Organism: BSR_inoc_Desulfovibrio_65_12

partial RP 39 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(1..588)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6Q8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 185.0
  • Bit_score: 146
  • Evalue 2.80e-32
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEG53004.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 185.0
  • Bit_score: 146
  • Evalue 3.90e-32
putative sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 210.0
  • Bit_score: 130
  • Evalue 4.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] asparagiforme → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 588
ATGGACAAAACAGAAATTTTCGGGATGGACTTTTCCACCTTCGTGCGGCTCATCGACAACCTCCATGATGAAATCATCATTTACGACAACAACTACCGCATGTTGTACGTGAACAAGGCCTGCGAACGGCACTATGGATTTACGCAGGCCGAAATGATCGGGTTGCCGTTTTGGGATGTCGTCAAGAAACACCGGGCCTGGGACCGTTCCGTGCTGCCAGCGGTGTACAAGTATAAGTGTCCGGTGAAGCAGGAGCAGAAAACGTACCTCGGACTTGACATTTTGAGTATCGCAACGCCGGTTTTGGACCCGAATGGAAATGTGCAATTCGTCCTCTTCAGCATTCGCGACAACTACCATGAAGGGAAAATCCCCTGTCGCGATGAACTGACGACAGACCAGGACGTCATTGAGGACGCCCCGCCGAGCGACCTTGTGTATCACAGCCGGCTCATGGAGATCGCCGTCGAGTCGGCCCGCAAGGTGGCCGACATCAGCTCCCCCTGTCTGCTCCTGGGCGAATCCGGCTGCGGCAAGAGCCTGTTGGCGAAATACATCCACTCCACGGGCAAACGGGCCGAGAAGCCC
PROTEIN sequence
Length: 196
MDKTEIFGMDFSTFVRLIDNLHDEIIIYDNNYRMLYVNKACERHYGFTQAEMIGLPFWDVVKKHRAWDRSVLPAVYKYKCPVKQEQKTYLGLDILSIATPVLDPNGNVQFVLFSIRDNYHEGKIPCRDELTTDQDVIEDAPPSDLVYHSRLMEIAVESARKVADISSPCLLLGESGCGKSLLAKYIHSTGKRAEKP