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BSR_inoc_132327

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_132327_1
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1727)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. EVN1 RepID=U7NLD0_9ALTE
DNA repair protein {ECO:0000313|EMBL:KJR96641.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
DNA repair ATPase
BSR_inoc_132327_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2133..3155
DNA (1023bp) protein (341aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9YHQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68039.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
C4-dicarboxylate transport system C4-dicarboxylate-binding protein
BSR_inoc_132327_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3100..3723
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98877.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
dctQ; C4-dicarboxylate transport system small permease
BSR_inoc_132327_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3741..5000
DNA (1260bp) protein (420aa)
TRAP transporter, DctM subunit n=6 Tax=Clostridium clostridioforme RepID=N9WUZ1_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ68037.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP-type C4-dicarboxylate transport system, large permease component
BSR_inoc_132327_5
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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5021..5701
DNA (681bp) protein (227aa)
GntR domain protein id=3453443 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GntR domain-containing protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_132327_6
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5726..6529
DNA (804bp) protein (268aa)
Transketolase, thiamine pyrophosphate-binding domain protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LIW8_TRESO
Transketolase, thiamine pyrophosphate-binding domain protein {ECO:0000313|EMBL:ERF59804.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
transketolase
BSR_inoc_132327_7
Fusobacterium periodonticum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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6531..7379
DNA (849bp) protein (283aa)
Transketolase, pyridine binding domain protein n=2 Tax=Fusobacterium RepID=C3WMZ3_9FUSO
Transketolase {ECO:0000313|EMBL:KGE63635.1}; TaxID=469599 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium periodonticum 2_1_31.;"
hypothetical protein
BSR_inoc_132327_8
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7717..8910)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWU8_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY13729.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_132327_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8994..9551
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W410_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37882.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator DhaS
BSR_inoc_132327_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9592..10992
DNA (1401bp) protein (467aa)
Coenzyme PQQ biosynthesis protein E n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LL04_ACEWD
coenzyme PQQ biosynthesis protein E
Coenzyme PQQ biosynthesis protein E {ECO:0000313|EMBL:AFA50113.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
BSR_inoc_132327_11
unknown

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10944..11405
DNA (462bp) protein (154aa)

This feature has no annotations

BSR_inoc_132327_12
unknown

Not on your lists

comp(11219..11743)
DNA (525bp) protein (175aa)

This feature has no annotations

BSR_inoc_132327_13
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

comp(11933..12793)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RJB9_FIBSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL26505.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
BSR_inoc_132327_14
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

comp(12831..13601)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRL2_MICAA
hypothetical protein
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
BSR_inoc_132327_15
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13718..14368
DNA (651bp) protein (217aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QWD8_SPHPG
putative ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AEV29436.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_inoc_132327_16
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(14511..15815)
DNA (1305bp) protein (435aa)
HipA N-terminal domain protein n=1 Tax=Escherichia coli 4.0967 RepID=I2WX53_ECOLX
toxin HipA
Tax=RBG_16_Chloroflexi_52_11_curated
BSR_inoc_132327_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(15815..16066)
DNA (252bp) protein (84aa)
Transcriptional regulator, XRE family id=2626164 bin=GWB1_Spirochaetes_59_5 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
XRE family transcriptional regulator
Tax=GWB1_Spirochaetes_59_5_curated
BSR_inoc_132327_18
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16428..18086)
DNA (1659bp) protein (553aa)
Transposase IS4 family protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RRH6_SPHGB
Transposase IS4 family protein {ECO:0000313|EMBL:ADY14228.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
transposase IS4 family protein
BSR_inoc_132327_19
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18403..19284)
DNA (882bp) protein (294aa)
Transcriptional regulator, RpiR family n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN7_SPHGB
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ADY12087.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_132327_20
unknown

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19286..19420
DNA (135bp) protein (45aa)

This feature has no annotations

BSR_inoc_132327_21
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19417..20691
DNA (1275bp) protein (425aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN6_SPHGB
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADY12086.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_132327_22
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20852..21364
DNA (513bp) protein (171aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN5_SPHGB
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADY12085.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_132327_23
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21425..21670
DNA (246bp) protein (82aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN5_SPHGB
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADY12085.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_132327_24
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21667..22521
DNA (855bp) protein (285aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN4_SPHGB
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADY12084.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_132327_25
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22551..23441
DNA (891bp) protein (297aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN3_SPHGB
N-acetylmuramic acid 6-phosphate etherase
BSR_inoc_132327_26
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23438..23686
DNA (249bp) protein (83aa)
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXN2_SPHGB
BadF/BadG/BcrA/BcrD type ATPase
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ADY12082.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Displaying 26 items

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