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BSR_inoc_Sphaerochaeta_globosa_51_10

BSR_inoc_Sphaerochaeta_globosa_52_10
In projects: BSR_inoc  |  Biological_sulphate_reduction_analysis

Consensus taxonomy: Sphaerochaeta globosa  →  Sphaerochaeta  →  Spirochaetales  →  Spirochaetia  →  Spirochaetes  →  Bacteria

Description

VERY DODGY BIN, removed many contigs based on different taxonomy and GC and converage

Displaying items 201-250 of 679 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
BSR_inoc_114673
Species: Paenibacillus durus (50%)
2 2847 bp 53.18 11.70 79.98
BSR_inoc_54686
Species: Sphaerochaeta globosa (100%)
2 1313 bp 46.61 7.65 69.23
BSR_inoc_86561
Species: Sphaerochaeta globosa (100%)
2 1273 bp 54.20 8.96 99.45
BSR_inoc_36696
Species: Sphaerochaeta globosa (100%)
2 1793 bp 54.38 7.95 92.53
BSR_inoc_151731
Species: Sphaerochaeta globosa (50%)
2 2216 bp 47.43 9.48 67.82
BSR_inoc_107551
Species: Sphaerochaeta globosa (50%)
2 1410 bp 47.73 4.89 68.37
BSR_inoc_160460
Species: Sphaerochaeta globosa (50%)
2 1033 bp 51.02 2.90 86.83
BSR_inoc_83909
Species: Sphaerochaeta globosa (100%)
2 1367 bp 52.08 7.79 99.41
BSR_inoc_150405
Species: Campylobacter jejuni (50%)
2 1440 bp 50.83 7.08 86.46
BSR_inoc_163178
Species: Sphaerochaeta globosa (100%)
2 1494 bp 49.53 4.62 93.98
BSR_inoc_147711
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2267 bp 49.10 4.50 89.19
BSR_inoc_172988
Species: RifOxyA12_full_Lentisphaerae_48_11_curated (50%)
2 1378 bp 52.18 4.35 99.06
BSR_inoc_30922
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1138 bp 50.88 3.95 90.69
BSR_inoc_199107
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1450 bp 49.03 5.59 79.03
BSR_inoc_92001
Species: Mycoplasma yeatsii (50%)
2 1180 bp 51.86 14.87 99.41
BSR_inoc_183101
Species: Sphaerochaeta globosa (100%)
2 1161 bp 53.06 8.91 100.26
BSR_inoc_219122
Species: Sphaerochaeta globosa (100%)
2 2174 bp 52.71 7.73 96.32
BSR_inoc_150474
Species: Sphaerochaeta globosa (100%)
2 1112 bp 54.14 4.59 97.39
BSR_inoc_34812
Species: Sphaerochaeta globosa (100%)
2 1083 bp 52.63 4.85 100.00
BSR_inoc_222660
Species: Sphaerochaeta globosa (100%)
2 1052 bp 47.24 7.41 42.21
BSR_inoc_116163
Species: marine sediment metagenome (50%)
2 1090 bp 49.45 6.06 81.74
BSR_inoc_56832
Species: Sphaerochaeta globosa (100%)
2 3401 bp 55.10 9.70 96.68
BSR_inoc_204119
Species: Sphaerochaeta globosa (100%)
2 1703 bp 54.32 4.32 98.47
BSR_inoc_10600
Species: Sphaerochaeta globosa (100%)
2 1325 bp 52.38 6.11 86.04
BSR_inoc_16172
Species: Sphaerochaeta globosa (100%)
2 2059 bp 55.95 7.07 102.87
BSR_inoc_45613
Species: Sphaerochaeta globosa (100%)
2 1368 bp 48.39 4.39 96.49
BSR_inoc_197823
Species: Haloplasma contractile (50%)
2 1546 bp 50.00 9.61 71.41
BSR_inoc_163321
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1754 bp 53.14 7.70 100.40
BSR_inoc_163333
Species: Sphaerochaeta globosa (50%)
2 2771 bp 51.28 6.39 73.40
BSR_inoc_103655
Species: Sphaerochaeta globosa (100%)
2 1177 bp 51.57 4.08 88.96
BSR_inoc_41892
Species: Sphaerochaeta globosa (100%)
2 1535 bp 55.77 3.81 94.01
BSR_inoc_179322
Species: Pseudomonas aeruginosa (50%)
2 1978 bp 49.65 11.53 99.34
BSR_inoc_44510
Species: Desulfosporosinus sp. HMP52 (50%)
2 1143 bp 52.93 8.01 49.61
BSR_inoc_8020
Species: Sphaerochaeta globosa (100%)
2 1252 bp 52.16 7.79 91.29
BSR_inoc_203104
Species: Sphaerochaeta globosa (100%)
2 1043 bp 48.51 4.03 98.66
BSR_inoc_38395
Species: Sphaerochaeta pleomorpha (50%)
2 1042 bp 48.37 5.04 92.42
BSR_inoc_45706
Species: Sphaerochaeta globosa (100%)
2 1829 bp 56.31 11.15 90.05
BSR_inoc_32441
Species: Sphaerochaeta globosa (66.67%)
3 2347 bp 52.11 9.01 90.63
BSR_inoc_140842
Species: Sphaerochaeta globosa (66.67%)
3 2335 bp 55.85 11.88 92.51
BSR_inoc_103796
Species: Sphaerochaeta pleomorpha (100%)
3 2057 bp 50.70 3.79 92.46
BSR_inoc_19020
Order: Spirochaetales (66.67%)
3 3273 bp 50.69 8.62 85.24
BSR_inoc_52475 3 1117 bp 53.80 3.49 100.45
BSR_inoc_209291
Species: Sphaerochaeta globosa (100%)
3 1970 bp 55.23 8.76 100.51
BSR_inoc_106622
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1539 bp 53.80 3.41 92.40
BSR_inoc_105238
Species: Sphaerochaeta globosa (66.67%)
3 1962 bp 53.92 9.25 95.87
BSR_inoc_101342
Species: Sphaerochaeta globosa (66.67%)
3 3851 bp 51.86 10.48 84.60
BSR_inoc_219572
Species: Sphaerochaeta globosa (100%)
3 2259 bp 52.81 5.38 99.87
BSR_inoc_110502
Species: Sphaerochaeta globosa (100%)
3 1833 bp 50.52 8.18 94.76
BSR_inoc_78452
Species: Sphaerochaeta globosa (100%)
3 2732 bp 56.30 10.76 100.26
BSR_inoc_177340
Species: Sphaerochaeta globosa (100%)
3 2793 bp 50.66 9.18 93.23
Displaying items 201-250 of 679 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.