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BSR_inoc_2_72870_32

Organism: BSR_inoc_2_Bacteroidia_46_15

near complete RP 31 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(31615..32169)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 184.0
  • Bit_score: 220
  • Evalue 1.20e-54
Peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 184.0
  • Bit_score: 213
  • Evalue 3.80e-53
Peptide deformylase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF1_BACPM similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 184.0
  • Bit_score: 216
  • Evalue 2.10e-53

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGATATTGCCGATATATATTTACGGATCTTCCGTTCTAAAACAAAAAGCACAGGACATATCTCCGGATTATCCCAATCTGGACCAATTGATCAGTGACATGTGGGAAACCATGTATTATGCGGACGGGGTTGGACTGGCCGCTCCCCAGATTGGCCTTTCCATACGAATGTTTGTGGTTGACGGCAAGGACCTTTCAGAAGACCGCCCCGAATTGAAAGATTTTAAAAGACTGGTTATCAATCCCCGCATATTGGAAGAAAGTCCGGAAACGGTGGTTTACCAGGAAGGCTGTTTGAGTGTTCCCAAATTATACGCGGATGTGGAACGTCCCGAAAGTATAAAACTGGCCTATCTTAACGAAAATTTTGAACCGGTGGAAGAATGGTTCCAGGGGATGGCTGCCCGTATGGTTCAGCATGAGTTTTCCCATCTGGAAGGAGAACTTTTTGTAGACCGCCTGCCTCCCATTCGCAAAAAAATGATCCAAAGTAAATTACGCGCCATGACCCGCGGAGAAGTAGATACATTTTACAAAACAAAGATCGTTAAATAA
PROTEIN sequence
Length: 185
MILPIYIYGSSVLKQKAQDISPDYPNLDQLISDMWETMYYADGVGLAAPQIGLSIRMFVVDGKDLSEDRPELKDFKRLVINPRILEESPETVVYQEGCLSVPKLYADVERPESIKLAYLNENFEPVEEWFQGMAARMVQHEFSHLEGELFVDRLPPIRKKMIQSKLRAMTRGEVDTFYKTKIVK*