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BSR_Lac_UAPBR_middle_p_84583_26

Organism: BSR_Lac_UAPBR_middle_p_Sphaerochaeta_55_11

near complete RP 52 / 55 BSCG 48 / 51 ASCG 13 / 38
Location: 25203..28523

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 1106.0
  • Bit_score: 1535
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKY9_SPICD similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 1106.0
  • Bit_score: 1535
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 1106.0
  • Bit_score: 1535
  • Evalue 0.0

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Taxonomy

Sphaerochaeta coccoides → Sphaerochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 3321
ATGCAGACACAAATCGCCGCGTCCGTTCAATCGTATATCAAAAACAGCGATGCTTACAAGAGCTATTGCAGGAACTGCCATGTCCCGTTGTCGGTCGAAGGGCTTGACGGATTTCCTCTGGCAGAATGTCTCCGTCTGTTCGCCCGGAAGACTTCCGGCAGAGTCTGGGCGGTCTGTTCTACCGAAGAATCAGCACTACAGATCCTCAAGGACGGTTCGTTCACAGACGGTGGATGGTCTAGGAAAGCGAAGGAACCGAAGTATTCTCGCAACGCACGGATCGCGGGCATGACGGACGACATGCCATTTTTCTATATCCCTTCCACTGGCAAGACTTTGTACAGTCATTGGGAGGGAAGCCAGCGGGAATATGAACAGTTGCAACGCCTTGCGTCCGTCATCGATGCGAAGCAGGGCGTCGTCGTAACACATCTGCGAGCTTTCGTTTCGCCAGTCGTTTCTCCGAAATCGATTCTGGACGCTTCACTTGAACTCGTGGTAAACGCTCCGTTCGATCCGATTACGGTTGCGAACCGTCTTGCCGACAGTGGGTATTTCCGTGCGCCGAGTACCAGTTCTCCGGGGGAGTTCTCATTGCGTGGGGAAGTTCTGGACATCTATCCGCACGAGCTGGAGTATCCGGTCAGAATCTATGCTGACTGGGACAGGATCGATCGCATCTGTCTATTCGATCCAATTACGCAAGAAACGATCAAAAGCATGGGGAGAATCCAGATCAGCATCCTCGGAGAACGGGATTCGGTCATACTTGATTCGGTCGCCCCGTACATCCATGACGACGACTATTTCTTTTTTGTCGGCGATGAGCGGCTGGAAACGTCCTTCCATTCCTTGGAAGTCGAGGCGAAAGCTCTGTTCAGGACTGCCTTCCTGACCGATAGGAACGCAACGAGACCGCAGGATATGCTTTTCGACTATCCGTCGTTCAAGGAACGGTGCTCTGACAGCGTTACCGTCGTGGATATTTCCCGTCAGCGGACCGACAGCTTTCGGTTCGATATCGAAGGCCCACGGTCATATTTCGGAAACTTCACCATGCTGCGCGAAGAACTCGGACAGCTGACCGCCAATGGCTGGAAGATCTCGATTTTCACAGGAACGGAACTGCAGCGGAAACGACTGGAGCAGATGCTGAAGCAGTTTTCATCTATCGAATATATCGAACGGGAGATTTCCGGGGGATTCGCTATTCCGTCGCTCAAGGTGATCGCCATCTGCGACCATGAGATATTCGGCAGGCGCAAGCAGGTCGTTCAGATGCTCCATCATGTCCAGTCCAGTCCTCTCGACTCATTCGTCGATCTGAACGAGGGTGACTATGTCGTGCACGTGAACTACGGTATCGGTCGGTTCGTGAAGATCGACCGTGTCCGGATGGGGGACAAGGAACGGGACTACATCAAGATACTCTATGCCGGCGACGAGCATCTGTATGTCCCCATCGAGCAGGCGAACCTGATTCAGCGGTATATCGGAAGTGAAGGCGGTATCCCGAAACTTGACAAGCTCGGCGGACAGGGATGGGAGAACAAGAAAGCCAAGGCTCGCAAGTCGGCGGAAGAGCTGGCGGGACGGTTGATCAAGCTGTATGCACGACGCAAGAATACAATGGGATACCCCTTCGCGAAGGATACCGATTGGCAGCTTCAGTTCGAAGCGTCATTCCCGTACGACGAGACCGAGGATCAGCTGACCTGCATCGACGATATCAAGCAGGACATGGAGAGTCCGATCGTCATGGACCGGCTGGTCTGCGGCGATGTCGGATACGGGAAGACTGAAATCGCGTTCAGGGCTGCGTTCAAGGCTGTCATGAGTGGCAAGCAAGTGGCGTTTCTCGCTCCGACAACGATTCTCGCGGAACAACATTATTCGAACTTTCTCAAGCGACTAGGGGATTTTCCCGTGAAAGCCGGGCAGCTGTCCCGTATCGTACCGAAGAAAGAGCAGGGGCGGACATTGAAACTACTGGCAACGGGAAGCGTCGACGTACTGTTCGGTACGCATCGCATCCTGCAAAAAGATGTCGTCTTCCATGATCTCGGATTGTTGATCGTGGACGAGGAACAGCGTTTCGGTGTCAAGGACAAGGAGAAGATCAAAGAGATGCGGGCTTCGGTCGACTCCCTCTCCCTGTCCGCCACCCCGATTCCTCGTACTCTTTATATGTCGCTGCTGAAGATCCGGGACATGTCGTTGCTGACGACTCCGCCGATCGCCAGAAGACCGATCAAGACGGTCATCCAGCATTTCGACGAGGACATGATCGAGCGGGCGATTCGATACGAAGTCGGGCGGGGAGGGCAGGTCTTCTACCTGCACAATCGGATCGAGACGCTGGAGGAAGTTGTCTGGGGATTGCAGAAACGGATGCCGGAACTGATCATCGAGAGCGCCCATGGACAGATGGACAGCATCGCGCTTGAGGATACGATGCGCAGGTTCGTCCACGAAGGAATTCAGGTACTTGTGGCTACGACGATCATCGAGAACGGCATCGATATCCCGAATGTGAATACGATCATCATCGATAGGGCCGACATGTACGGGGTAAGTCAGCTGTATCAGTTGCGAGGTCGTGTCGGACGAAGCGATAAAGAAGCCTATGCGTATTTGTTCTATCCGGAAGCGGCCGCACTGAGCGAACTCGCAGTCAAGCGGCTGAAAGTGATCAGCGAGCATACGGAACTCGGTGCTGGGTTCAAGGTCGCCATGAAGGACATGGAGATCAGAGGTACCGGGAATCTGCTGGGACGAGAGCAGAGCGGACAGATGGCGTCCGTCGGACTCGACATGTATCTGCGTATCCTCGACGAAGCGATCGCGGATCTGCAGAAAAGTGACGATGCGGAAAGCCAGAAGGAAGTGTTTCTCGAACTAGACTACAGCGGTTTCATTCCGGACAGCTATATCAAGGCTCCCTCCGTCAAGTTCGAAATCTACAAGAAGATTTCTTCGATCCAGGATGAGGAACAGCTCCAGTCACTTACCGCGGAGATGGAGGATCGGTTCGGCCAGATGCCGGAAGAGGTCGCGAACCTGCTGTACATCGCCGAGCTGAAGATCATCTGCCGGAAGCTGTCGATCTTCCACCTCGCAGAGCGCAACGGAATCGTCACCGTCGAGTTCTCTCGGCTTGCCAGCCTGTCGATCGACAAGTTGATCGATCTGGTGCGCCTGTCCGGCGGGAAGGTGAAGATCGATGCGAAGCGGATGAATTTCATGGAGATGAAGACCGAGGCCATTTCCTTGAAGGACAAGGCGCTGTTTATTCTGGAGAAGTTGCAGCGACTGGTATAG
PROTEIN sequence
Length: 1107
MQTQIAASVQSYIKNSDAYKSYCRNCHVPLSVEGLDGFPLAECLRLFARKTSGRVWAVCSTEESALQILKDGSFTDGGWSRKAKEPKYSRNARIAGMTDDMPFFYIPSTGKTLYSHWEGSQREYEQLQRLASVIDAKQGVVVTHLRAFVSPVVSPKSILDASLELVVNAPFDPITVANRLADSGYFRAPSTSSPGEFSLRGEVLDIYPHELEYPVRIYADWDRIDRICLFDPITQETIKSMGRIQISILGERDSVILDSVAPYIHDDDYFFFVGDERLETSFHSLEVEAKALFRTAFLTDRNATRPQDMLFDYPSFKERCSDSVTVVDISRQRTDSFRFDIEGPRSYFGNFTMLREELGQLTANGWKISIFTGTELQRKRLEQMLKQFSSIEYIEREISGGFAIPSLKVIAICDHEIFGRRKQVVQMLHHVQSSPLDSFVDLNEGDYVVHVNYGIGRFVKIDRVRMGDKERDYIKILYAGDEHLYVPIEQANLIQRYIGSEGGIPKLDKLGGQGWENKKAKARKSAEELAGRLIKLYARRKNTMGYPFAKDTDWQLQFEASFPYDETEDQLTCIDDIKQDMESPIVMDRLVCGDVGYGKTEIAFRAAFKAVMSGKQVAFLAPTTILAEQHYSNFLKRLGDFPVKAGQLSRIVPKKEQGRTLKLLATGSVDVLFGTHRILQKDVVFHDLGLLIVDEEQRFGVKDKEKIKEMRASVDSLSLSATPIPRTLYMSLLKIRDMSLLTTPPIARRPIKTVIQHFDEDMIERAIRYEVGRGGQVFYLHNRIETLEEVVWGLQKRMPELIIESAHGQMDSIALEDTMRRFVHEGIQVLVATTIIENGIDIPNVNTIIIDRADMYGVSQLYQLRGRVGRSDKEAYAYLFYPEAAALSELAVKRLKVISEHTELGAGFKVAMKDMEIRGTGNLLGREQSGQMASVGLDMYLRILDEAIADLQKSDDAESQKEVFLELDYSGFIPDSYIKAPSVKFEIYKKISSIQDEEQLQSLTAEMEDRFGQMPEEVANLLYIAELKIICRKLSIFHLAERNGIVTVEFSRLASLSIDKLIDLVRLSGGKVKIDAKRMNFMEMKTEAISLKDKALFILEKLQRLV*