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LacUAPBReffluent_at_i_15843_12

Organism: BSR_Lac_UAPBR_effluent_at_1_GWC2_Bacteroidetes_46_850_curated_52_9

near complete RP 38 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(17847..18431)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZL36_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 179.0
  • Bit_score: 181
  • Evalue 6.00e-43
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN16449.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 179.0
  • Bit_score: 181
  • Evalue 8.40e-43
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 190.0
  • Bit_score: 115
  • Evalue 8.70e-24

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAATACACATACCAGGGATATTCAAACACTGACGAAAAAGGAGTTTGAAAATCTTTTTTGTACCTTTTATGCGCAGGTGGTTGCATTTGCTACGGGAATGCTGGAAGACAAAGATGCGGGAGAAGATGTTGCCCAGGAGGTGTTTGTTTATGTTTGGGAGAAACGGAACAAGCTTCATCTTCAGGAGGGTATGAAAAGTTATCTTTTCCGTTCAGCTTATACAAAATCAATCGATTATCTGAAGAAAGGCACCCGGGCAGATAAGATCTCACAAAAGATGTTATCGGCCGTCACGGAGGAGTACCGATGTTATCTTGACAATGACTGTGAACCGCTGAAAAAGCTTTTCAGCAAGGATTTTGATGAAAATTTACAAAAACTGCTGGAACAACTCCCCGAAGTGAAACGAAGAATATTTATGCTGACCTATTACGAAGGATTAAAAGCTCGGGAAGTTTCCGAATTAATGGATATACCGCAAAGAACGGTAGAAAGTCATATATATCATACAATGAGGTTTTTGCGCACAAAAATATCTTCCTCCGATTTTTTTCTGTTGTTTCTGCTTCTTCGTTTATTCTAA
PROTEIN sequence
Length: 195
MNTHTRDIQTLTKKEFENLFCTFYAQVVAFATGMLEDKDAGEDVAQEVFVYVWEKRNKLHLQEGMKSYLFRSAYTKSIDYLKKGTRADKISQKMLSAVTEEYRCYLDNDCEPLKKLFSKDFDENLQKLLEQLPEVKRRIFMLTYYEGLKAREVSELMDIPQRTVESHIYHTMRFLRTKISSSDFFLLFLLLRLF*