ggKbase home page

LacUAPBReffluent_at_i_20651_44

Organism: BSR_Lac_UAPBR_effluent_at_1_GWC2_Bacteroidetes_46_850_curated_52_9

near complete RP 38 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(49036..50094)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Porphyromonas somerae RepID=UPI00035FB32F similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 344.0
  • Bit_score: 401
  • Evalue 8.70e-109
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCY09285.1}; TaxID=1262916 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; environmental samples.;" source="Porphyromonas sp. CAG:1061.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 332.0
  • Bit_score: 395
  • Evalue 6.70e-107
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 347.0
  • Bit_score: 383
  • Evalue 5.30e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Porphyromonas sp. CAG:1061 → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1059
ATGATGCAACTGACAAATAAAATTGCTTATACAACCTGTCTGCTCGCCATTTTTGCGGGCGGGTGCGGGAAGAAATCAACGGAAAGCAGCGGTGATGCCGCGAAAACCGCAACAACCGTAACCGTTTATACGGCGAAAGAGATGGAATATACTCCCGTGTTGAGTTTTACCGGTACGGCCGAAGCAAACAGAGAGGCCGATCTCGGCGCTTCCATCCCGGGACGGGTGGAGAAGATTCACTTCGCCAAAGGCAGTTATGTCCCCGAAGGAGCCCTGATAGCCGAATTGTCAGACGAAATGCTGATCCAGGCAGAGATTGAACTGGAAGCGATTCGCAAAGATTTTGAGCGGATGAGCCGCCTGAAAGAAAAAGAGAGTGTGAGCGTGATGGACTATGATCATATCAAGGCTAAGTTCGATGCCTCACAAACCAAAGTAAATATGCTGAAGAAGAACACCTCTATTACCGCTCCCTTTGGAGGAGTTATCACCGACATCACCGTGCAGGAGGGAGAAAATTACACGTTTATTCCTTCTGTAAGCTCCGATCTGAAGGTACAGGGCGGTATCCTTACTATCCGCCAGCTGAATCCGTTGAAAATAGCGATCGAGGTGAACGAGAAAGAGATTGGTTCCATCAGCCGGGGGCAACAGGCAGAGGTGTCGTTTGATGCCTATCCCGGTGAGGTTTTTGCAGGAAAGGTGAGTTATATTTCACCCGTCCTGTCTACGATGAACCGTACCGCCACGGTGGAGCTGACGATTCCCAACCGAGAGATGAAACTGAAGCCGGGTATGTTCTGCCGGGTCTCGATTTCAATGGTACCGACAACCGGCGTATTTGTCCCCTTAAATGCTCTCTACCGGCAGCAGGGAACGGGAGAAGATTACCTCTTTGTGGTGCTCGGTCAGAACAAGGTCACTCGTCGGAGAGTCACCCGTGGCGAGTCAAAAGAGGAGCTAATCCATATTCCTGAAATCAAGGCTGGCGAAAGTGTCGTGGTCGATGGGAAAAATAAATTAAACGAAGGTTCACCCGTTGAAATCGTAAACAGGTAA
PROTEIN sequence
Length: 353
MMQLTNKIAYTTCLLAIFAGGCGKKSTESSGDAAKTATTVTVYTAKEMEYTPVLSFTGTAEANREADLGASIPGRVEKIHFAKGSYVPEGALIAELSDEMLIQAEIELEAIRKDFERMSRLKEKESVSVMDYDHIKAKFDASQTKVNMLKKNTSITAPFGGVITDITVQEGENYTFIPSVSSDLKVQGGILTIRQLNPLKIAIEVNEKEIGSISRGQQAEVSFDAYPGEVFAGKVSYISPVLSTMNRTATVELTIPNREMKLKPGMFCRVSISMVPTTGVFVPLNALYRQQGTGEDYLFVVLGQNKVTRRRVTRGESKEELIHIPEIKAGESVVVDGKNKLNEGSPVEIVNR*