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LacUAPBReffluent_at_i_68558_3

Organism: BSR_Lac_UAPBR_effluent_at_1_GWC2_Bacteroidetes_46_850_curated_52_9

near complete RP 38 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(3655..4215)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=4520033 bin=GWF2_Bacteroidetes_49_14 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 164
  • Evalue 9.40e-38
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 187.0
  • Bit_score: 133
  • Evalue 5.10e-29
Tax=GWF2_Bacteroidetes_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 164
  • Evalue 1.30e-37

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Taxonomy

GWF2_Bacteroidetes_49_14_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGAGTTCAAACCCAACAGATTGGGAAATATGGCTCTCCTTCAAAAGAGGAGATCAAAAGGCTGTTTCCTTTATTTACAGGAAATATTTCCCGGTATTGTATCGATATGGATTAAAATTCACCCAGCACTCTTCCTGGGTAGAAGATACCATCCAGGATCTGTTTGCTGAACTGATCAAAAATCACAAAACCGTAGGGAATACGGATAATATTCAGTTTTATCTTTACAAATCGTTTCGGCGTAAGCTCGTCAGGAAACTGGGTCATGCACACAGATATGACCTCACCGGCGCGATGGACGATGATCCTCCGTTTGAAGTCGTCTGGTCTGTTGAACAGGATCTCATCAGAGAGGAGGAAAACAAACAACGATCAGCAATGCTTATCAAAGCACTCTCAGAGCTTACCTCCCGTCAGAAGGAAGCCGTTTATCTGCGTTTTACAAAAGAACTCGATTATGCGGTGATCGCCGACATCATGAACATCAGCATCGAGGCTTGCCGTAACCTTATTTCGAAGGCGGTTTCCAACCTGAGACAAGCGGTGAACAAAAAAAAGTAA
PROTEIN sequence
Length: 187
MSSNPTDWEIWLSFKRGDQKAVSFIYRKYFPVLYRYGLKFTQHSSWVEDTIQDLFAELIKNHKTVGNTDNIQFYLYKSFRRKLVRKLGHAHRYDLTGAMDDDPPFEVVWSVEQDLIREEENKQRSAMLIKALSELTSRQKEAVYLRFTKELDYAVIADIMNISIEACRNLISKAVSNLRQAVNKKK*