ggKbase home page

BSR_Lac_UAPBR_inlet_at_2_46843_5

Organism: BSR_Lac_UAPBR_inlet_at_2_Clostridiales_48_10

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6434..7189)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 246.0
  • Bit_score: 277
  • Evalue 1.10e-71
tRNA pseudouridine synthase A n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U473_ETHHY similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 246.0
  • Bit_score: 277
  • Evalue 7.90e-72
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 246.0
  • Bit_score: 277
  • Evalue 2.20e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ethanoligenens harbinense → Ethanoligenens → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
TTGCGAAATTTATTGGTGACGCTGCGCTTTGACGGCCGCACATTTTGCGGCTGGCAGGTTCAGAAAAATGCCCCAACTGTGATGCAGGCGTTTCAGGATGCGCTGGAAGCGGTGTTAAAGCATCGCCCTGACGTCAAGGGCTGTTCCCGGACCGATTCAGGGGTTAGTGCCGCGATGTACTGTGTTTCGTTTTTAACTGACAGCCGTATTCCGTGCGAGCGTTTGGTACCGGCTTTAAATGTCAAGTTGCCTCCTACCATTGCAGCGACAGCCTGCCGTGAGGTTCCACACGATTTTCACGCGCGCTATTCCTGCAAGGGCAAACGCTATTGCTACCGGATTTTGAACAGATCCGTGCGCGACCCCTTTTATGAAGGGCTTGCGCTGCACCTTCCACACCATTTGGATGTTGAATTTTTACACGCGCAGGCGCAGCAATTTGTCGGCACTTTTGATTTTGCTGCGTTTCAGAATAGCGGCTCATCGGTTGAAGACACTGTGCGCACAATTTTTGACTGTTCTGTGGAACGTCGGGGCGATCTGATTGAGTTTTTGGTCGCGGGCGACGGATTTCTCTACAACATGGTGCGTATTATGACCGGCACATTGTTGGATATTTCCAAGGGCAATCTCGCGACTGATAGCATCCCTGATATTATTGCCTCAAGAGAACGCAGCCGCGCCGGCATGACGGCACCCGCACGTGGGCTGATGCTGATGGAGGTTTTTTACGACGATATATTTGCGTCAACTTAA
PROTEIN sequence
Length: 252
LRNLLVTLRFDGRTFCGWQVQKNAPTVMQAFQDALEAVLKHRPDVKGCSRTDSGVSAAMYCVSFLTDSRIPCERLVPALNVKLPPTIAATACREVPHDFHARYSCKGKRYCYRILNRSVRDPFYEGLALHLPHHLDVEFLHAQAQQFVGTFDFAAFQNSGSSVEDTVRTIFDCSVERRGDLIEFLVAGDGFLYNMVRIMTGTLLDISKGNLATDSIPDIIASRERSRAGMTAPARGLMLMEVFYDDIFAST*