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BSR_Lac_UAPBR_middle_p_1_46561_18

Organism: BSR_Lac_UAPBR_middle_p_1_Thermotogae_38_9

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(18399..18965)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BGN8_PETMO similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 196
  • Evalue 1.70e-47
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:CEP78771.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 186.0
  • Bit_score: 208
  • Evalue 8.10e-51
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 196
  • Evalue 4.90e-48

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Taxonomy

Defluviitoga tunisiensis → Defluviitoga → Petrotogales → Thermotogae → Thermotogae → Bacteria

Sequences

DNA sequence
Length: 567
GTGCGTCTGAAAGAAGAAAAATTTCTCGAAGAGTTGAAGAATAAGGATTCAAAAGCATTTGAAAAGCTATATTCTGAATATACTGCTATGGTTTTCAGCATATTGCGGAACTTTGTAAGACCAGGAGAAATTGATGATGCAATGCAGGAGGTTTTTCTGAGAGTTTTCAGAGGAATAAATAAGTTTAGGGGAAGTTCAAAACTTTCAACATGGATATACCGCATAGCTGTCAATGTCGGGAAAGATTATGTGAAAAAATATTCTGATGATAAGGTTCAGACTATCGATCTTCAGAACGATGTTAATGAAAAATATGTAAAAAGCTCTGTCAGTGACAGTGACTCTCAGGATGATGTTTTGCAGGGGGTTAACTATAGTTCCATCATAAAGGTAATGGAGAAATTATCGCCTGGAGACAGGCTCCTTATACAAATGCGTGATGTGGACAGACTTAGTTATAAAGAAATTTCCAAGCTGCTTGAAAAGCCATTAGGGAGTGTTAAAAGCGGTTTGTATTATGCCCGAAAAAGACTTGCAAAGCTTATTGAACAAGAAAAAATAATATAA
PROTEIN sequence
Length: 189
VRLKEEKFLEELKNKDSKAFEKLYSEYTAMVFSILRNFVRPGEIDDAMQEVFLRVFRGINKFRGSSKLSTWIYRIAVNVGKDYVKKYSDDKVQTIDLQNDVNEKYVKSSVSDSDSQDDVLQGVNYSSIIKVMEKLSPGDRLLIQMRDVDRLSYKEISKLLEKPLGSVKSGLYYARKRLAKLIEQEKII*