ggKbase home page

BSR_Lac_UAPBR_middle_p_1_74708_5

Organism: BSR_Lac_UAPBR_middle_p_1_Thermotogae_38_9

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(6348..6590)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J812_MARPK similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 75.0
  • Bit_score: 92
  • Evalue 2.00e-16
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 75.0
  • Bit_score: 92
  • Evalue 5.60e-17
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 75.0
  • Bit_score: 92
  • Evalue 2.80e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Marinitoga piezophila → Marinitoga → Petrotogales → Thermotogae → Thermotogae → Bacteria

Sequences

DNA sequence
Length: 243
ATGGCAGAAAAAACCAAAATCCAGGACAAGCTGCTGAACATAGCCAGAGTAAACAACATAGAACTTAAGATCTTTTTTGAAGGAACGTTCAGTATTTCAGGTTACATAAAGTCATTTGATGAGTTTACAGTGCTGATAGAAAAAGACGGACAGCAGACTCTTATATATAAGAGCTCCATAAGCCGTATAGATCCCATGAAGACTATAATGCTGTTTCCAAAGGATTCAACCTTCAAAAAATAG
PROTEIN sequence
Length: 81
MAEKTKIQDKLLNIARVNNIELKIFFEGTFSISGYIKSFDEFTVLIEKDGQQTLIYKSSISRIDPMKTIMLFPKDSTFKK*