ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

BSR_Ace_UAPBR_effluent_at_132472_16

Organism: BSR_Ace_UAPBR_effluent_at_Gammaproteobacteria_63_27

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 3
Location: comp(17422..17757)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI000381F43F similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 105.0
  • Bit_score: 105
  • Evalue 2.40e-20
anti-sigma-factor antagonist similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 108.0
  • Bit_score: 104
  • Evalue 2.00e-20
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 108.0
  • Bit_score: 104
  • Evalue 9.70e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGCACATTACCGACGAAACCCTTACCGACGCCCAAGTCGTTCACGTCAGCGGACGCCTGGACAGCACCACCTCCCCCCTGCTCGAACAATACCTGCTCAGCGTGGTGGAGTCCCACCCTCGCGTGATCGTCGATTTCACCCGTCTGGACTATATCTCCAGTGCCGGCTTGCGCGTGCTCCTGATGGCCGCCAAGAAAAGCCGTGCACGCTCGGGCGCCTTCGCCCTGTGTGCCCTCAAACCCGCACTGCGGGAAGTCTTCGAAATCAGTGGATTCCTGTCGATCATCGCGGTTCACCCGGATGCCGAAAGCGCCCGCCAGGCCTTTTCTTCCTGA
PROTEIN sequence
Length: 112
MHITDETLTDAQVVHVSGRLDSTTSPLLEQYLLSVVESHPRVIVDFTRLDYISSAGLRVLLMAAKKSRARSGAFALCALKPALREVFEISGFLSIIAVHPDAESARQAFSS*