ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

BSR_Ace_UAPBR_effluent_at_41960_4

Organism: BSR_Ace_UAPBR_effluent_at_Sphaerochaeta_globosa_60_6

near complete RP 47 / 55 MC: 3 BSCG 48 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: 3295..4164

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RZT2_SPHGB similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 292.0
  • Bit_score: 355
  • Evalue 4.50e-95
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 292.0
  • Bit_score: 355
  • Evalue 1.30e-95
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADY14833.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 292.0
  • Bit_score: 355
  • Evalue 6.30e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphaerochaeta globosa → Sphaerochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAACACCTAGGAATCAGAGCCCACGACCTGGGCAGCTTCGCCTCAGGTGAGGCATTGGCCGCCAAAGCCGCGGTGTACGGCCCCTCCATCCCCATCCAGCTGGCATTCGCCAAGGTCATCACTCCCGCTCCCAAGCTCACCGACGAGTATGTCGCCGCCTTCGCCGAGGCACTCAAGGCGCGGGGGGTATGGACGGCCGTCCTCGGCTGCTACATCAACCCGGTGCACCCCGACGAGGCGGCTCGGGACGAGCAGCTCTCCCGCTTCGAGGAGCACCTCCGTCTCGCCCCGCTTCTGGGCAACCCCATCGTCGGCACCGAGACTGGATCGGCGAATCCCGACTGCTCCTTCTCTCTCCGGACCGGTGAGCCGCAGGTGCTCTCCCTGCTCTACCGCAGCATCGAGCGCCTGCTCGACAGCGCGGTGCGCTACAACAGCGTCATCGGCATCGAGCCGGTTGCCCGTCAGCACACCATCGGCAGCATCGAACGGATGCACACCCTGGTCGAGAAGTTCGACACCCCGCACCTGCGCGTCATCTACGACCCGGTCAACCTCGTACCGTGGACCGGAGTGCCCGAGGCCGACGGTACCTGCCGCAGTACCCCCTCCGATGAAGCGCAAGAGGCATTCTTCGCCCGCGCCCTCGATGCCTTCGGCTCCAAGATCGCGGCCCTGCACATCAAGGACTATCGTCTGGATGAGCAGGGGTGGAAGATCGGGAATCTGCCGACGGGAACGGGGGTCCTGAACTGGAGGCTCCTCGCCTCGATGCTCACAGAGCGCGCCATCGATGCCCCGGGGCTCCTGGAGAACGCCCAAGTCGATACCATTGCAAAAACCCTGGCGACCCTCGCCGCCTACTGA
PROTEIN sequence
Length: 290
MKHLGIRAHDLGSFASGEALAAKAAVYGPSIPIQLAFAKVITPAPKLTDEYVAAFAEALKARGVWTAVLGCYINPVHPDEAARDEQLSRFEEHLRLAPLLGNPIVGTETGSANPDCSFSLRTGEPQVLSLLYRSIERLLDSAVRYNSVIGIEPVARQHTIGSIERMHTLVEKFDTPHLRVIYDPVNLVPWTGVPEADGTCRSTPSDEAQEAFFARALDAFGSKIAALHIKDYRLDEQGWKIGNLPTGTGVLNWRLLASMLTERAIDAPGLLENAQVDTIAKTLATLAAY*