ggKbase home page

BSR_Ace_UAPBR_inlet_at_100384_16

Organism: BSR_Ace_UAPBR_inlet_at_Bacteria_57_9

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 20856..21782

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2853024 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 276.0
  • Bit_score: 300
  • Evalue 1.80e-78
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 314.0
  • Bit_score: 291
  • Evalue 2.40e-76
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 304.0
  • Bit_score: 308
  • Evalue 7.20e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC1_FULL_Spirochaetes_54_7_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 927
ATGATACAGCTCAGGCCGTATGACGATGTTTCGAGCTCTCGCGGCAGTCTTGAACCGAAGAATCCTGATCATATCCCCTATAAAAGCCGTAAAACAGCCAGACGGGATAAAGCTGAGTCGGAAGAACAGGATCCGCTTTCCCTTTACCTCTATCAGATATCCAAGATCGAATTGCTCGACGCCGTCGAGGAGCAAAGGCTCGGAAGAGAAATAAGCGAGCTTGTTTCCGGGCTGGAGGCTCTGCGGGCGCAAGCGATAAACGCCGACGACCCGATCGATAGCAAGCGCGAAATACAGAAAACCGAACGGCGCTTAACCGACGCCAAGCAGAAAATGGTGAAGGCCAATCTCAGGTTGGTGGTATCGATCGCCAAGGGCTATCAGCATCGGGGTTTGGGTCTTTTGGATTTGATCGACGAGGGGAATATCGGACTTTTGGAAGCGGTGGGGCGTTTTGATTATAGTAGGGGCTACCGTTTTTCGACCTATGCCACCTGGTGGATCAGGCAGGCAATAATAAAAAGCCTGGCCGATCAGGGAAGGGTGATAAGAATCCCCATTCATATGCTCAATATCATTCGAAAGTGTTATTACACCGCGAGGCAGCTCACCCAGGAACTCAGCCGCGACCCGGGGCTGGACGAAATCGCCGACAGGCTGAACATGAGCCGACAAAAACTGATCAAGGTTATGGAGTTCTCCCAAAGCACGGCCAGCCTCGATTCGGTCATGGACGGGGATAATTCCACCTCCCTTTCCGAACTGATACGCGACGATTCGACCGTCGATCCGTATTCCGAGGTTTTTAAAACCACCTTGAAAGAAGTGCTCGACTGCGTGCTTCAGGGCCTGAGCGCCCGGGAAAACACCATTTTAAAACTTCGCTATGGTCTTTCAGGCGAGTCGACCCATACACTCGAAGAGACT
PROTEIN sequence
Length: 309
MIQLRPYDDVSSSRGSLEPKNPDHIPYKSRKTARRDKAESEEQDPLSLYLYQISKIELLDAVEEQRLGREISELVSGLEALRAQAINADDPIDSKREIQKTERRLTDAKQKMVKANLRLVVSIAKGYQHRGLGLLDLIDEGNIGLLEAVGRFDYSRGYRFSTYATWWIRQAIIKSLADQGRVIRIPIHMLNIIRKCYYTARQLTQELSRDPGLDEIADRLNMSRQKLIKVMEFSQSTASLDSVMDGDNSTSLSELIRDDSTVDPYSEVFKTTLKEVLDCVLQGLSARENTILKLRYGLSGESTHTLEET