ggKbase home page

BSR_Ace_UAPBR_effluent_p_31806_1

Organism: BSR_Ace_UAPBR_effluent_p_Hydrogenophilales_68_7

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 4
Location: comp(2..547)

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding protein LysM; K06194 lipoprotein NlpD id=12496988 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 327
  • Evalue 6.30e-87
peptidoglycan-binding protein LysM similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 180.0
  • Bit_score: 184
  • Evalue 1.40e-44
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:AAZ96790.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 180.0
  • Bit_score: 184
  • Evalue 7.10e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGATCCGGCACGCGCGGCTATCTTGCGCCCGCGCGGCGGGCAGGCGAACGGCAACGCTGATGGGGCTGGCCCTGCTTGCCGGGCTGGCCGCATGCACCGCGCCCGGCCCGGCACCGGTCACCCAGATGGGGACGCGCACGCAATCCGCGAAACCTGCGCGCGAAGCGCCGCGTCCCGAGCGTCCGGCGACGCCGCAGGTCGCGCCTTCGACCACCGGCGAGCATGTCGTGGCAAGAGGCGACACGCTCTATGCCATCGCTTTCGCCAACAGCCTCGACTACCGCGAGCTGGCGGTCTGGAACCGTCTCGAATCGCCCGATCGCATCTACGTCGGCCAGACGCTGCGTCTCACGCCGCCGCCCGGCGCAGTGGAAACCCGCCCGCTCGAGGACGCGGCACCGCTTGCGGCACAGCCGCTGGCCGAGGCGCCGTTGCTGCGGACGCCGCAGGGGGTGCTGCTGCCCTACAGCGAAGCGAACTGGGCGCAGGTGAACGGCGCGCCGGCGGCAACGGCATCGACCACGGCTGCCCCCACACCGCCTGGC
PROTEIN sequence
Length: 182
MIRHARLSCARAAGRRTATLMGLALLAGLAACTAPGPAPVTQMGTRTQSAKPAREAPRPERPATPQVAPSTTGEHVVARGDTLYAIAFANSLDYRELAVWNRLESPDRIYVGQTLRLTPPPGAVETRPLEDAAPLAAQPLAEAPLLRTPQGVLLPYSEANWAQVNGAPAATASTTAAPTPPG