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BSR_inoc_33217_25

Organism: BSR_inoc_Thiotrichales_48_37

near complete RP 51 / 55 BSCG 50 / 51 ASCG 15 / 38 MC: 2
Location: 22062..23456

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 386.0
  • Bit_score: 365
  • Evalue 9.80e-98
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RLMD_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 386.0
  • Bit_score: 365
  • Evalue 7.00e-98
RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 386.0
  • Bit_score: 365
  • Evalue 2.00e-98

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Taxonomy

Thiomicrospira crunogena → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGGCTCAGCCTGGTAGAGCACCGTCATGGGGTGGCGGGGGTCGTAGGTTCAAATCCTACTGTCCCGACCAAATTTACCTCAAGTTTTTATTCTGCTTTCTTCTCGTTCAACACACCTTCTTTAATGCACACCAAGACACCCTCATTATGATTAAACTGCCTAAGCGCCAATCCGGCTCACCAAAAATCAAGCTCTCGACCCTAAATGGCACCTATCAACAGGTTCATATTGACGGATTAACGCATGAAGGCCAAGGCGTTGGACGTATCAACGGCAAGGCGGTGTTCGTTGAAAATGCTTTACCCGACGAAATCGTTGATATTGCCATTCGGCAAGATCATCCGCAGTATGCACAAGCTCGCGTAATCCAGTTCCACCAAACCAGCACACAACGCACCACGCCATTTTGCACTTATTTCGGTCAATGTGGCGGCTGTCAACTGCAACATCTTTCAGCCGAAGGTCAACGCCACTGGAAACAACATAACTTTTTTAGCCAACTCGAGCAGCAGCTTGACACGCGTAAAATGGAACGCATCCCACCAATTTACGCCGACGATACAGCCTACCGTCGCCGGGCTAAATTTGTGCTTGTAAAAGATGCCAAGACTAAACAAGCCTGCCTAGGATTTCGTCAAGCGCACAGCCATGCAGTCATTGATATTGCATCCTGTCCAATTTTAGCTGCTCCGCTCAATCAAGCCTACCAAACCTTGCGTTTTGACCTACTTAGCCAAGCCAGTCGTCAAGCGAAAGAAATCAAACTGCTCGCCACTGAGCAAGGCGTTTGGCTAAACGACCACAGCACCAGCGGCATCAACGAAGCGCCACACTACCTTGTTGATGACCTCACCCTACAATTCGAACCCACAGGATTTATTCAAGTCAATGCCCGCATAAACGAGGCCTTGGTTCAAACGGCCCTCAACTGGCTACAATCTAACGATACCCAGCGGGTATTAGACCTATTCTGTGGTATAGGCAACTTTAGCCTACCTTTGGCGCGTCGCGTAAAGCAGGTAGTCGGCGTTGATTTAGACCCACAAGCGATTGCCCACGCGCGAGCTAATGCCCAGCACAACCAACTTCCTCACGCCACTTTCCACAATGCAGACCTATTTCAACCAATAGAACAGCAGCCTTGGTGGCAACAATCCTACGACATTATCCTGCTCGACCCTGGTCGCCAAGGAGCCCAACAAATATGTGAACAACTTGGCAAGCACGCTGCCCCTACGCTGCTTTATATTTCATGTAACAGCAGCACCTTGATTCGAGATCTAAAACACCTTCAACAGCACGGATATCGTCTAAAAAAAGCGACCCTGTTTGACATGTTCCCACACACCAGTCACTACGAAAGCATGGTGCTGCTCGAACGCAAAACACACTAA
PROTEIN sequence
Length: 465
MAQPGRAPSWGGGGRRFKSYCPDQIYLKFLFCFLLVQHTFFNAHQDTLIMIKLPKRQSGSPKIKLSTLNGTYQQVHIDGLTHEGQGVGRINGKAVFVENALPDEIVDIAIRQDHPQYAQARVIQFHQTSTQRTTPFCTYFGQCGGCQLQHLSAEGQRHWKQHNFFSQLEQQLDTRKMERIPPIYADDTAYRRRAKFVLVKDAKTKQACLGFRQAHSHAVIDIASCPILAAPLNQAYQTLRFDLLSQASRQAKEIKLLATEQGVWLNDHSTSGINEAPHYLVDDLTLQFEPTGFIQVNARINEALVQTALNWLQSNDTQRVLDLFCGIGNFSLPLARRVKQVVGVDLDPQAIAHARANAQHNQLPHATFHNADLFQPIEQQPWWQQSYDIILLDPGRQGAQQICEQLGKHAAPTLLYISCNSSTLIRDLKHLQQHGYRLKKATLFDMFPHTSHYESMVLLERKTH*