ggKbase home page

BSR_inoc_181266_15

Organism: BSR_inoc_Firmicutes_35_7

near complete RP 48 / 55 MC: 4 BSCG 50 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(15767..17863)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 697.0
  • Bit_score: 1148
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 674.0
  • Bit_score: 1057
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2T9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 697.0
  • Bit_score: 1148
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2097
ACTCGTGAAAGAGCTGGCTTTGAGGTTCGTGATGTTCATACATCTCACTATGGGCGTATTTGTCCAATTGAAACACCTGAGGGGCCAAATATTGGGTTGATATCCAATCTGACTTCTTATGCACGGGTTAATGAATATGGTTTTATTCAAACGCCATATCGATTAGTTGAAAACGGGAAAGTATCTGAAGAAATCGTTTATTTATCAGCTGATGATGAAGAAGATTATATCATTGCTCAAGCTAATGAAGTCTTAAATGGTGAACTAGTTAATGAAGAAGTTGTTGCACGTCACAAAGGTGAAACGATCATAGCGGACAAAAAAGACGTTGAATTAGCCGATGTTAGCCCTAAACAAATCGTTTCGGTCGCTACTGCTTGTATTCCGTTCTTAGAAAATGATGATGCTTCGCGTGCTTTGATGGGCGCCAACATGCAAAGGCAAGCTATTCCATTATTAAAACCTTCTTCTCCATTAGTTGGTACCGGTGTTGAATATCGAGTAGCGAAAGATTCAGGCAGTGGTATAACTGCTGAGGGAGATGGCGTTGTTTCTTATGTTGACGCAAATAAGATAATAGTTGATGAGAAAAATGGACAACGTGAGTATCGTTTATCAAAATTTAGACGATCTAACTCTGGTACTTGCATCAATCAACATCCAATCATTCGCCGAGGCGAAAAGATTGAAAAAGGTGATGTTTTAGCTGATGGACCAGCTATGGAAAATGGTGAACTAGCACTTGGACAAAACGTAACTATAGCGTTTATGACTTGGTATGGTTATAACTATGAAGATGCTATCATAATGTCTGAAAGATTAGTAAAAGAAGACGTTTATACTTCGATTCATATCGAAGAATATGAAATCGAAGTTAGAGAAACGAAATTAGGTCCTGAAGAGATTACAAGAGATATCCCCAATGTCTCAGAAAATTCATGCCGTCATCTAAATGCTCGTGGAGTTGTTATGGTTGGCGCTGAAGTAAAAGAGGGAGATATCTTAGTTGGTAAGGTTACTCCAAAGGGTCAAAGTGAAATATCACCAGAAGAAAAACTCTTATTAGCTATATTTGGTGAAAAATCAAGAGAAGTTAGAGATAACTCATTGAAGGTTCCACATGGTGGAGCGGGTATCGTTCAAATGGTTCGTTTCTTCCGTCGGGAAGATGGACATGAGTTGCCACCTGGAGTAAATGAAGTTGTAAAAGTGTATATCGTTCAAAAACGTAAGATATCTGAAGGTGATAAAATGGCTGGAAGACATGGTAATAAGGGTGTAATATCTCGAATATTACCGGTTGAAGATATGCCGTTTATGCCGGATGGTACGCCAGTTGATATAATGTTGAATCCATTTGGTGTCCCTTCACGTATGAACATTGGTCAGGTTCTTGAGATTCATCTTGGTATGGCTGCTAAAAAACTTGGTGTTAAATTTGCAACGCCAGTATTTGATGGCATTAACAATGAGGAATTGCAGTCGATAATGAGAGAAGCGGAAAGTACACCTGATGGCAAAATGGTGTTATTTGATGGTCGGACGGGTGAACCGTTTGATGAAAGAATATCAGTTGGTGTTATGTATATGATCAAGTTAGCTCACATGGTTGATGATAAATTGCATGCTCGGGCAACAGGTCCATATTCATTAGTTACCCAACAACCATTAGGTGGTAAGGCCCAAAATGGTGGACAACGTTTTGGTGAAATGGAAGTTTGGGCACTTGAAGCATATGGAGCCGCTTATACCTTAGGTGAAGTTTTAACGATCAAATCGGATGATATTGTTGGTAGGACTAAAACCTATGAAGCCATCATTAAAGGAAAAGATATTCCTGCACCTGGTGTACCAGAATCATTCCGTGTATTAAAGCATGAACTACAAGCTTTAGCCATTGATGTTAAGATGTTGGATAAAGATGGCAGAGAGATAGATATCAAAAAGATGGAAGCAGAGGAAGTTAAACAGATCGCAGCTGTTGAAGAAGAAATTCAGCAAGAGGTTGTGGTTGATAACGCTGCTGATGATGATCTGCCTGAAGCTATCGTTGGCTTTGGTGATGAAGATTACAGTGAATATGAGAATGAAGAGTAA
PROTEIN sequence
Length: 699
TRERAGFEVRDVHTSHYGRICPIETPEGPNIGLISNLTSYARVNEYGFIQTPYRLVENGKVSEEIVYLSADDEEDYIIAQANEVLNGELVNEEVVARHKGETIIADKKDVELADVSPKQIVSVATACIPFLENDDASRALMGANMQRQAIPLLKPSSPLVGTGVEYRVAKDSGSGITAEGDGVVSYVDANKIIVDEKNGQREYRLSKFRRSNSGTCINQHPIIRRGEKIEKGDVLADGPAMENGELALGQNVTIAFMTWYGYNYEDAIIMSERLVKEDVYTSIHIEEYEIEVRETKLGPEEITRDIPNVSENSCRHLNARGVVMVGAEVKEGDILVGKVTPKGQSEISPEEKLLLAIFGEKSREVRDNSLKVPHGGAGIVQMVRFFRREDGHELPPGVNEVVKVYIVQKRKISEGDKMAGRHGNKGVISRILPVEDMPFMPDGTPVDIMLNPFGVPSRMNIGQVLEIHLGMAAKKLGVKFATPVFDGINNEELQSIMREAESTPDGKMVLFDGRTGEPFDERISVGVMYMIKLAHMVDDKLHARATGPYSLVTQQPLGGKAQNGGQRFGEMEVWALEAYGAAYTLGEVLTIKSDDIVGRTKTYEAIIKGKDIPAPGVPESFRVLKHELQALAIDVKMLDKDGREIDIKKMEAEEVKQIAAVEEEIQQEVVVDNAADDDLPEAIVGFGDEDYSEYENEE*