ggKbase home page

BSR_Lac_UAPBR_effluent_at_10919_10

Organism: BSR_Lac_UAPBR_effluent_at_Firmicutes_59_13

near complete RP 46 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 11247..12026

Top 3 Functional Annotations

Value Algorithm Source
ltrA2; group II intron-encoded protein LtrA (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 251.0
  • Bit_score: 334
  • Evalue 2.70e-89
RNA-directed DNA polymerase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EIL5_CLOPA similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 251.0
  • Bit_score: 334
  • Evalue 9.60e-89
Retron-type reverse transcriptase {ECO:0000313|EMBL:KAJ49241.1}; Flags: Fragment;; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 251.0
  • Bit_score: 340
  • Evalue 1.10e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium tetanomorphum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGTCAACGGAACTGAGCAAAATCGCGGAAAAGGCTAAGACTGACCCGGAGCTGCGCTTTACGTCCCTGGCTCATTTGCTTACGCCGGAATTTCTCAAGGAGACCTGGAAGCAGATGAATCGAAAGGGCGTTGGCGGGGTGGACGGGGAGACCATCAGGGACTACGAGAAGGACCTGGATGGGCGCATAAGCGATCTGCATGGGCGACTCAAGGCAGGTCGCTACAAGGCCCCTCCGGTGCGCCGCGTTAACATCCCGAAAGGGAACGGAAAGATGCGGACACTGGGCATTCCGACCGTGGAGGACCGATTAGTCCAAAGAGCGGTTGCGAGAATCCTGGGGGCAATCTATGAGGCTGACTTCTACGACGTCTCGTATGGATTCCGGCCAGGGCGAAACCCCCATCAGGCGCTTCACAAGCTACGAAACTGTGTCATGGCAGGGAGAGTGAGTTACGTATTCGAGGCCGACATCCGAGGGTATTTTGATCACATCAACCACTATTGGTTGATGCGGATGTTAGGGGCACGGATAGGGGACACGAGAATCCTGCGGCTGATCGAGAAGTGGCTACGGGCTGGGGCAATGGAGAATGGAGTAGTCATAGTGACGGGCGAAGGCACACCGCAGGGTGGGTCGATTTCGCCGCTCCTATCGAATGTCTACCTCCATTACGTGCTCGATCGCTGGTTCGAAATCGGTTGCAGGCCGAGCTTCCAAGGCGAAGCGACGCTTATCCGTTTTGCCGATGATTGTGCGCCACGAAGGCAAACGGGCTGA
PROTEIN sequence
Length: 260
MSTELSKIAEKAKTDPELRFTSLAHLLTPEFLKETWKQMNRKGVGGVDGETIRDYEKDLDGRISDLHGRLKAGRYKAPPVRRVNIPKGNGKMRTLGIPTVEDRLVQRAVARILGAIYEADFYDVSYGFRPGRNPHQALHKLRNCVMAGRVSYVFEADIRGYFDHINHYWLMRMLGARIGDTRILRLIEKWLRAGAMENGVVIVTGEGTPQGGSISPLLSNVYLHYVLDRWFEIGCRPSFQGEATLIRFADDCAPRRQTG*