ggKbase home page

BSR_Lac_UAPBR_effluent_at_11176_1

Organism: BSR_Lac_UAPBR_effluent_at_Firmicutes_59_13

near complete RP 46 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 337..708

Top 3 Functional Annotations

Value Algorithm Source
LysM domain protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSV7_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 97.0
  • Bit_score: 64
  • Evalue 6.70e-08
Putative LysM domain protein {ECO:0000313|EMBL:KFI59227.1}; TaxID=561180 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallicum DSM 20093 = LMG 11596.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 112.0
  • Bit_score: 65
  • Evalue 3.20e-08
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 105.0
  • Bit_score: 63
  • Evalue 4.20e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium gallicum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCTATCAAGCCACCCCGGTTCAGCAGACCTCGCCAGTCGCCGCGCAGCACGTCGTCGCAGGCTCCATCGCGGTGTTCTGGGCATCTCAAAACTCCTTCATGTGTTGATCGCCGGGCTTTTGATCGGGATTGTCGCATCGGTTATCGTTTGGGGCCTGTCGGAAACCGCGCCGCCCGCGCAATCAGCTGAGCTCGAGCAGTACGTCGTGGTTACGGTTCAGCCAGGCGACACTCTATGGAGCATTGCCCGCCGCGTCAGTGAAGGCAAGAGCGACCTGCGCGTACTCACGCACCGAATACAGAAGCTCAATTCGCTTGACTCCGCGATGTTACTGCCGGGGCAGAGCCTTACTGTACCTCTCCATCTGTAG
PROTEIN sequence
Length: 124
MLSSHPGSADLASRRAARRRRLHRGVLGISKLLHVLIAGLLIGIVASVIVWGLSETAPPAQSAELEQYVVVTVQPGDTLWSIARRVSEGKSDLRVLTHRIQKLNSLDSAMLLPGQSLTVPLHL*