ggKbase home page

BSR_Lac_UAPBR_effluent_at_41337_5

Organism: BSR_Lac_UAPBR_effluent_at_Bacteria_37_7

near complete RP 45 / 55 MC: 4 BSCG 49 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: 3100..3873

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 230.0
  • Bit_score: 212
  • Evalue 9.10e-53
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000363BACD similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 218.0
  • Bit_score: 219
  • Evalue 3.40e-54
Marine sediment metagenome DNA, contig: S01H4_C01047 {ECO:0000313|EMBL:GAG61169.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 243.0
  • Bit_score: 228
  • Evalue 7.90e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 774
ATGCCACTTACTAATATTATTATTAAGGACACTCCTTTAAAGATGAAAAATGGTATTCTGATTATTGATAAACCTGAAGGAATTTCTTCGGCAAAGACCGTTTTTAAAATAAAAAAACTTTTAAAATTAGACAAAGCAGGGCATACCGGTACATTGGACCCCTTTGCTACCGGAATACTGGTTTTATGCCTAAACCGTAGTACCAAAGAATCGGTTTATTTTACTAATCTTGATAAAACATACACCGCTACTATGATACTGGGCATTTCAACCGATACACAGGATTTAACCGGCAAAATAATAAGGATAAATAGTAAAAAAAGAGAGCAAAAAAGATTAACCCGGGATGAGATAGAGAGTGTTTTTGAAAAGTTTCAAGGAGATATATGGCAGACTCCTCCCATGTATTCAGCAATAAAATCAAAGGGGAAGCCGCTTTATCGCTTAGCTAGAAAGGGTATTAAAATAAAAGTTGAACCAAGGAAAATAAAAATATATCAATTATCCCTATTGAAGATAAGATGGGATATTTATCCTAGTATTTCTTTTAAAGTAAAGTGCTCCAAGGGGACTTATATTAGAACATTGTGTAATGATATCGGTGACTATCTGGGATTTGGTGCATATCTTTCTAATCTAAGAAGAGTCAAGGTTGGCAATATTTCTATCAATCAGTCTATCTCGCTTGCTGAATTTATGGAATTGCCCTCTGAAAAGCAGGCATCTTTGATAATATCTGCCAGTACAGTTTTGGATGATAAAATAATAAATTGA
PROTEIN sequence
Length: 258
MPLTNIIIKDTPLKMKNGILIIDKPEGISSAKTVFKIKKLLKLDKAGHTGTLDPFATGILVLCLNRSTKESVYFTNLDKTYTATMILGISTDTQDLTGKIIRINSKKREQKRLTRDEIESVFEKFQGDIWQTPPMYSAIKSKGKPLYRLARKGIKIKVEPRKIKIYQLSLLKIRWDIYPSISFKVKCSKGTYIRTLCNDIGDYLGFGAYLSNLRRVKVGNISINQSISLAEFMELPSEKQASLIISASTVLDDKIIN*