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BSR_Lac_UAPBR_inlet_at_72566_1

Organism: BSR_Lac_UAPBR_inlet_at_Desulfovibrio_vulgaris_68_10

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(3..1574)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DKM2_DESVM similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 524.0
  • Bit_score: 1001
  • Evalue 2.20e-289
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 524.0
  • Bit_score: 1001
  • Evalue 6.10e-290
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 524.0
  • Bit_score: 1001
  • Evalue 3.00e-289

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Taxonomy

Desulfovibrio vulgaris → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
ATGGGTAACATCAAGGATATTCAGCAGATCAAGTCGCTCATCGCCAAAGGCAAGGTGAACGGCTTTCTGACCTTCGACGAGGTCAACAAGGCCCTGCCGGCAGAGGTCAACACGCCCGAGCAGATCGAGGAGATCATCGGGATCTTCGACCAGTTGGAAATCGCCATCGTCGATACGGAGAAGGACGGCAAGAAGATTTCCGTGTCGCCCGGCGAGTCGGAAGAGGAACCCGCCGGCGAACCGGGGCTGGACCTGGTGGAGGACGAGGAGTCGGCGGACTATTCGTCGCGCTCCACCGACCCGGTGCGCATGTACCTGCGCGAGATGGGCGCCGTGCCGCTGCTGGACCGCGACGGCGAGGTGCAGATCGCCAAGAAGATCGAACTCGGCGAGCAGGACGTGCTGTACGCCCTGGTGGAAGTGCCGGTGGCCGTCGAGGAGTTGATCAACGTTGGCGAGGACCTCAAGCAGAACCGCATCAAGCTGAAGGACGTCGTCAAGACCATCGAGGAAGACGACCCCAGCGAAGACGAGATGAACCAGCGCTCGCGGGTCATCCTGCTGCTGGACGAGATCAAGCATACCTACAAGAAGAAGCGCAAGGTCTACTCCAAGCTGGACGACTGCTGCACCCTGGAACGCCGGGTCACCGCCATCCAGAAGGAAATCCTGGGCTTCAAGGAAGACATCGTCAACCGCCTGCGCGACATCAAGCTGGAAAAGACTCTCATCGACCGGATCATCGAGACGGTGGAGGACTACGTGCGGCAGATGCACAACTGCCAGCGCGACCTTTCCGCCTACATCCTGTCCACGGGCAAGACCCAGGTCGAGATCCAGGACATCTTCCGCATGCTGGAAGCGCGCGAGATGAACCCCGTGGCCGCGTCCGAGGCGCTGGGCATGACGGTGGAGGAACTGTTCTCGTTCAAGGAAATGATCATCGGCAAGATCGAAATCCTGAACCGGTTGCAGGACAAGTGCTGCCACAACGTCACGGACCTCGAGGAAGTGCTGTGGCGCATCAAGCGCGGCAACACCCACGCCATGCGCGCCAAGCAGGAACTGATCCGCTCCAACCTGCGCCTGGTGGTCAGCATCGCCAAAAAGTACACCAACCGCGGGTTGCAGTTCCTGGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAGTACCAGCGCGGCTACAAGTTCTCCACCTACGCCACCTGGTGGATCCGCCAGGCCATCACCCGGGCCATCGCCGACCAGGCCCGGACCATCCGCATCCCCGTGCACATGATCGAGACCATCAACAAGCTCATCCGCACCTCGCGCTATCTGGTGCAGGAGCTTGGCCGCGACCCCACCCCGGAGGAGATCGCCGAGCGCATGGACTATCCTTTGGAGAATGTCAAAAAGGTCCTCAAAATCGCCAAGGAGCCCATCTCCCTGGAGACGCCCATCGGCGACGAGGAGGATTCGAGCCTGGGCGACTTCATCGAGGACAAAAAGGCCCTGGCCCCGGCCGAGGAGGTGGTCAACACCAAGCTCGGCGAGCAGATCGGCAAGGTG
PROTEIN sequence
Length: 524
MGNIKDIQQIKSLIAKGKVNGFLTFDEVNKALPAEVNTPEQIEEIIGIFDQLEIAIVDTEKDGKKISVSPGESEEEPAGEPGLDLVEDEESADYSSRSTDPVRMYLREMGAVPLLDRDGEVQIAKKIELGEQDVLYALVEVPVAVEELINVGEDLKQNRIKLKDVVKTIEEDDPSEDEMNQRSRVILLLDEIKHTYKKKRKVYSKLDDCCTLERRVTAIQKEILGFKEDIVNRLRDIKLEKTLIDRIIETVEDYVRQMHNCQRDLSAYILSTGKTQVEIQDIFRMLEAREMNPVAASEALGMTVEELFSFKEMIIGKIEILNRLQDKCCHNVTDLEEVLWRIKRGNTHAMRAKQELIRSNLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQELGRDPTPEEIAERMDYPLENVKKVLKIAKEPISLETPIGDEEDSSLGDFIEDKKALAPAEEVVNTKLGEQIGKV