ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

BSR_Lac_UAPBR_inlet_at_17984_27

Organism: BSR_Lac_UAPBR_inlet_at_Alphaproteobacteria_55_21

near complete RP 41 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 27928..28785

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 279.0
  • Bit_score: 307
  • Evalue 1.90e-80
Shikimate dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG70_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 279.0
  • Bit_score: 307
  • Evalue 1.40e-80
aroE; shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 279.0
  • Bit_score: 307
  • Evalue 3.90e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGCCATGAAAGAACCATCAGCGGCAAAGCTAAAGTAGCCGGCGTTATGGGTTGGCCGGTCGAGCATACGAAATCGCCGCGGCTTCACGGTTATTGGCTTCGCCGATATAACATTGACGGGATCTATATCCCCATGGCGGTTGAGGCCGGTCATTTGGAACAAGCGCTTCGTGCGCTGCCTCTTTTGGGATTCAAAGGCTGTAATGTGACAATTCCTCACAAAGAACAGGCGCTCAAGTATGTGGACGTTCTTGACCCTGTCGCGCAAAGGGCAGGGGCGGTGAACACGATCATTGTTCGAGAAAAAGGAGAGCTGGAAGGAAAAAACACGGATGTTTTTGGGTTTAGCGAAAATCTGAAAACAGCCGGATTTGAATATAATAAAGCCTTTCCGTCGGCTGTTGTTTTGGGTGCCGGCGGCGTTGCGCGAGCCATGATCGTCGCGCTTCAGGATATGGGCTATCAAGACATCAGGATCGTCAACAGAAATAAGAATAAAGCTGAAGATATGACCAAAGCCATCGGAGGAAAAACGAAGCTCAAAATTTTTAGCATGGGAGAAACGGAAAAAGCGCTTGAAGGCGCGGGCCTTTTGGCTAATGCGACATCTTTAGGCATGGAGGGGCATGATCCTTTGGAAATAAACCTTTCTTTTTTGCCGCGCGAAGCGTGGGTTACCGATGCAGTTTATGCGCCCCTTGAAACAGCGCTTATTCGTCAGGCGAGACAGAAACATCTTCGCGCCGTTGACGGACTGGGCATGCTTTTGCATCAGGCGCGGGCGGGCTTTAAATCCTGGTTCGGACAGGAACCCGAAGTGACAAAAGAACTTCGGGCCTTTGTGCTCGAAGAATGA
PROTEIN sequence
Length: 286
MSHERTISGKAKVAGVMGWPVEHTKSPRLHGYWLRRYNIDGIYIPMAVEAGHLEQALRALPLLGFKGCNVTIPHKEQALKYVDVLDPVAQRAGAVNTIIVREKGELEGKNTDVFGFSENLKTAGFEYNKAFPSAVVLGAGGVARAMIVALQDMGYQDIRIVNRNKNKAEDMTKAIGGKTKLKIFSMGETEKALEGAGLLANATSLGMEGHDPLEINLSFLPREAWVTDAVYAPLETALIRQARQKHLRAVDGLGMLLHQARAGFKSWFGQEPEVTKELRAFVLEE*