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BSR_Lac_UAPBR_inlet_at_52637_14

Organism: BSR_Lac_UAPBR_inlet_at_Alphaproteobacteria_55_21

near complete RP 41 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(11973..12218)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=6 Tax=Methylobacterium RepID=HFQ_METC4 similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 76.0
  • Bit_score: 121
  • Evalue 3.10e-25
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 81.0
  • Bit_score: 122
  • Evalue 1.90e-25
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 76.0
  • Bit_score: 121
  • Evalue 8.70e-26

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 246
ATGACCGATACGCACCAAAATCTTCAGGACGCTTTTTTGAACCATCTTCGCAAAAATAAAATACCTTCAACGATCTTTCTTGTGAATGGCGTAAAACTTCAAGGGGTGTTAACCTCGTTCGATCAGTTCTCTCTTCTTTTGCGGCGGGATGGGCATGCCCAGCTTGTGTACAAACACGCAATCTCAACCGTGATGCCCGGCGTTCCGGTGCAAGGGTTTGAAGGCTTAGAAACCGTTGACGAATAA
PROTEIN sequence
Length: 82
MTDTHQNLQDAFLNHLRKNKIPSTIFLVNGVKLQGVLTSFDQFSLLLRRDGHAQLVYKHAISTVMPGVPVQGFEGLETVDE*