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BSR_Lac_UAPBR_inlet_at_117033_17

Organism: BSR_Lac_UAPBR_inlet_at_Alphaproteobacteria_55_21

near complete RP 41 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(19203..23414)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:KJB92491.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 1380.0
  • Bit_score: 2209
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEM3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 1390.0
  • Bit_score: 2204
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 1390.0
  • Bit_score: 2206
  • Evalue 0.0

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4212
ATGAACGACTTTATGAATATCTTTAATCAGCATAGCGCCCCGCAGACGTTCGATCAGATCCGTATCTCGATCGCCTCGCCAGAGCGCATTCGCTCCTGGTCTTTTGGCGAAATCAAGAAGCCGGAGACGATCAACTATCGCACGTTCAAGCCGGAGCGCGATGGTCTGTTCTGCGCGCGCATCTTTGGCCCGATCAAGGATTACGAATGTTTGTGCGGCAAGTACAAGCGCATGAAATATCGCGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTTCAGAAAGTGCGCCGCGAACGCATGGGCCATATTGAACTGGCCAGCCCCGTCGCGCATATCTGGTTTTTGAAGTCGCTGCCTTCGCGTATCGGGCTTTTGCTGGACATGACGCTCAAGGAAATTGAGCGCGTTCTGTACTTTGAAAACTTTATCGTGACGGAGCCTGGCCTCACCTCGCTTAAGCAAAACCAGCTTCTTTCGGAAGAAGAGTTTTTGACGGCGCAGGAAGATTTCGGTGAAGACAGCTTTACGGCTATGATCGGCGCGGAAGCGTTGAAGGTCATGTTGTGCGGCATTGATCTGCATGACGAAAAAATAAAACTGCGCGACGAGATGCAGGGCACGACCTCTGACGCCAAGCGCAAGAAGATCGTCAAGCGTTTGAAGTGCGTCGAAGCCTTCATCGAATCCGGCGCTCGTCCGGAGTGGATGATTCTCGATGTCGTTCCGGTCATTCCGCCGGAACTGCGCCCGCTCGTTCCTTTGGACGGCGGTCGTTTTGCGACGTCCGATCTGAACGATCTGTATCGCCGCGTCATCAACCGTAACAACCGTTTGAAGCGTTTGATTGAACTGCGCGCGCCGGACATCATCATCCGCAACGAAAAGCGCATGTTGCAGGAATCCGTGGACGCATTGTTCGACAACGGACGTCGTGGCCGCGTTATTACCGGCGCGAACAAGCGGCCTCTCAAGTCGTTGTCCGACATGCTCAAAGGCAAGCAGGGCCGCTTCCGCCAAAACTTGCTTGGTAAGCGCGTTGATTATTCGGGCCGTTCGGTTATCACCGTCGGGCCGGAACTGAAGCTGCATCAATGCGGTTTGCCGAAGAAGATGGCTCTCGAACTTTTCAAGCCGTTCATCTATGCCAAGCTGGAACTTTACGGCATGGCTTCCACGATCAAGGCCGCCAAGCGCATGGTCGAAAAGGAACGCCCAGAGGTTTGGGACATTCTTGAGGAAGTCATCCGCGAGCATCCGGTGATGTTGAACCGCGCTCCGACGCTGCATAGGCTTGGTATTCAGGCGTTCGAGCCGACCCTGATCGAAGGCAAGGCGATCCAGCTTCATCCGCTCGTTTGTACGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCTGTTCACGTTCCGCTTTCGCTGGAAGCCCAGTTAGAAGCTCGCGTGCTGATGATGTCCACGAACAACATTTTGTCTCCCGCGAACGGCAAGCCGATCATTGTGCCTTCGCAAGATATTGTTTTGGGCATCTATTACATCACGATGGATCGCAAGAGCTCCCCAGGCGAAGGCATGGCGTTCGCCAATATGGGCGAGATCGAACAGGCTTTGGACGCTGGGGCCGTCACGCTGCACAGCAAGATCAAGGCTCGTTATCACGGCGTGAACGCCAAGGGTGAACACGAAATCGTGCGCGTGGAGACGACGCCAGGTCGCATGATCCTTTCCGAGATTTTGCCGCGCCATCCGAACCTGCCGTTCAGCATCGTCAATCGTTTGTTGACGAAGAAGGATTTGACCAACGTTATCGACGCGGTTTACCGCCATTGCGGCCAGAAGGAGACGGTGATGTTCGCCGATCGCCTGATGGGCCTTGGCTATAAGCATGCTTGCCGCGCTGGCATTTCGTTCGGTAAGGACGATTTGATTATCCCCGAGTCAAAGGCGAAGCTTATCAAACAGGCCCAGTCTCAGGTTGACGAGTACGAGCAGCAATATCAGGATGGCTTAATCACGCGCGGCGAAAAATACAACAAGGTCGTCGACGTTTGGTCGGGCTGCACCGAAAAGGTCGCCGAAGAAATGATGAAGGGCATCTCCGACACGGGGCATGGCCACATCAATTCGGTGTACATGATGGCGCACTCCGGCGCGCGCGGCTCCGCCGCGCAGATCAAGCAGCTTGCCGGCATGCGCGGCCTTATGGCCAAGCCGTCGGGCGAGATTATCGAAACACCGATCATCTCGAACTTCAAAGAGGGCTTGACCGTTCTTGAGTATTTCAACTCGACCCACGGCGCGCGCAAAGGTTTGGCCGACACCGCTTTGAAGACGGCGAACTCGGGTTACCTCACGCGCCGTTTGGTTGACGTCGCGCAAGACGCCATCATCACCGAGGACGATTGCGGCACCGATGCGGGCCTGACCGTCAAGACGGTGATTGAAGGCGGCGAAGTCATCGCTCCGCTTTCCGAGCTGATCCTTGGCCGCACGGCAGCGCAGGACATCAAACATCCCGTCACAGGCGACGTGATCGTTTATGCGGGCGAGTTGATTGACGAAACATTAGTAGATGCCGTTGATAAAGCGGGCATTGATACCGTTCAGGTGCGTTCGGTTTTGACTTGTCGCAGCGAAACGGGCATCTGTGCCAAGTGCTATGGGCGCGATCTGGCTCGCGGCACGCCGGTCAATGTCGGCGAGGCTGTGGGCGTTATCGCCGCGCAGTCCATTGGCGAACCTGGCACGCAGCTTACGATGCGAACCTTCCACATCGGCGGCGCGGCGCAGCGCGGCGCGGAAGCCAACGCGGTGGAGGCTTCTTTCGATGCGAAGGTGGAAATCAAGAATGCCACCCTTGTTGAAACTGCCGATGGCCGCCAACTCGTGATGAGCCGCAACTGCGAAGTTGTGTTGCTTGACGATTTGGGTCGTGAAAAGGCGCGTCATCGCGTTCCGTATGGCACCAAGCTGCTTGCCAAGGAAAGCGAGATGGTCAAGAAGGGCCAGAAGCTCGCCGAGTGGGATCCCTATACGCTGCCGATTATCACGGAGCGCGAAGGCATCGTGAAATATGCCGATCTGATCGAAGGCACGACCATTCGCGAAGTTATGGACGAAGCGACGGGCATTTCCTCGAAGAAGGTCATCGACTTCCGCCAACAGGCTCGCAGCGCGGAACTTCGTCCCCGTATCATGATGCACGACAAGAAAGGCAATCCTGTCAAATTGTCGAGCGGCATGGACGCGCGTTATTTCTTGCCTGTGGATGCCATTCTCAATGTGCAAGATGGCGCGCAGGTTCGCGCGGGCGACATTTTGGCCCGCATCCCGCGCGAAGGATCGAAAACGCGCGATATCACGGGCGGTCTGCCCCGTGTCGCGGAGCTGTTTGAAGCTCGTCGTCCGAAGGATTTCGCGATCATTTCGGATATCGAGGGCCGCGTGGAATTCGGAAAGGACTACAAGACGAAGCGCCGCATCATCGTGCGTCCACTCGACGAGTCTTTGGAGCCGCGCGAGTATCTGATCCCCAAGGGCAAGCATGTCGCCGTTCAGGAAGGCGATATGGTTGAACGTGGCGATCTTTTAATTGACGGAAGCCCCGTTCCGCATGACATCTTGGCCGTTCTCGGCGTGGAAGCCTTGGCAGCTTACATCATCAACGAGATTCAAGAGGTCTATCGTCTGCAAGGCGTCAAGATCAACGACAAGCACATCGAAGTCATCGTGCGCCAGATGCTGCAGAAAATCGAAATCACCGACCCGGGCGACACGACATTCTTGCAAGGCGAACAAGTTGATCGCACGGAGTTTGTCGAGGTCAATAGCAAGGCGGTTCTCGAAAGCCTTCGTCCGGCGCAGGGCCGCGCGGTGCTGCAAGGCATCACCAAAGCCAGCTTGCAGACTCGCTCCTTCATCTCGGCCGCTTCGTTCCAAGAAACGACGCGCGTTTTGACAGAAGCCGCTGTGGCGGGCAAGCGGGACGATCTCGAAGGACTCAAGGAAAACGTGATCGTCGGGCGCTTGGTTCCGGTTGGTACGGGTTCCTACGTCAATCGTCTGCGTCGCATTGCTGCCGCGCGCGATTTGGAGATGGATCGTGCCGACGCCGAGCGAGCCGCGCAGAAGGAAACCGCTGCTCAGGCTGCCGCGCTTGCTGTCGCTGTTCAGGAAGCTCAGGCCGGAGAAGAGCCGATTGAAGGCTAG
PROTEIN sequence
Length: 1404
MNDFMNIFNQHSAPQTFDQIRISIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLQKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLKEIERVLYFENFIVTEPGLTSLKQNQLLSEEEFLTAQEDFGEDSFTAMIGAEALKVMLCGIDLHDEKIKLRDEMQGTTSDAKRKKIVKRLKCVEAFIESGARPEWMILDVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVITVGPELKLHQCGLPKKMALELFKPFIYAKLELYGMASTIKAAKRMVEKERPEVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDIVLGIYYITMDRKSSPGEGMAFANMGEIEQALDAGAVTLHSKIKARYHGVNAKGEHEIVRVETTPGRMILSEILPRHPNLPFSIVNRLLTKKDLTNVIDAVYRHCGQKETVMFADRLMGLGYKHACRAGISFGKDDLIIPESKAKLIKQAQSQVDEYEQQYQDGLITRGEKYNKVVDVWSGCTEKVAEEMMKGISDTGHGHINSVYMMAHSGARGSAAQIKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDAIITEDDCGTDAGLTVKTVIEGGEVIAPLSELILGRTAAQDIKHPVTGDVIVYAGELIDETLVDAVDKAGIDTVQVRSVLTCRSETGICAKCYGRDLARGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEANAVEASFDAKVEIKNATLVETADGRQLVMSRNCEVVLLDDLGREKARHRVPYGTKLLAKESEMVKKGQKLAEWDPYTLPIITEREGIVKYADLIEGTTIREVMDEATGISSKKVIDFRQQARSAELRPRIMMHDKKGNPVKLSSGMDARYFLPVDAILNVQDGAQVRAGDILARIPREGSKTRDITGGLPRVAELFEARRPKDFAIISDIEGRVEFGKDYKTKRRIIVRPLDESLEPREYLIPKGKHVAVQEGDMVERGDLLIDGSPVPHDILAVLGVEALAAYIINEIQEVYRLQGVKINDKHIEVIVRQMLQKIEITDPGDTTFLQGEQVDRTEFVEVNSKAVLESLRPAQGRAVLQGITKASLQTRSFISAASFQETTRVLTEAAVAGKRDDLEGLKENVIVGRLVPVGTGSYVNRLRRIAAARDLEMDRADAERAAQKETAAQAAALAVAVQEAQAGEEPIEG*