ggKbase home page

BSR_Ace_UAPBR_effluent_at_19259_2

Organism: BSR_Ace_UAPBR_effluent_at_Firmicutes_35_5

near complete RP 46 / 55 MC: 3 BSCG 48 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: comp(184..447)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YB57_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 86.0
  • Bit_score: 122
  • Evalue 1.90e-25
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 86.0
  • Bit_score: 122
  • Evalue 2.70e-25
SSU ribosomal protein S20P similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 87.0
  • Bit_score: 96
  • Evalue 3.20e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 264
ATGCCTAACATTAAATCTCAAAAGAAACGTTCCATTACCAATATAAAGCGCAATGCTGCTGTTAAGGCCCAGAAATCAGAGCTTAAATCTTTGATCAAAAATGTCTTACTAGCAGTAGAAGCGAATGATAATGAAAAAGCTGTGGCAACATATAATGAAGTTTCTAGTAAATTGGATAAGTCCATCACTAGCAACATTCATCACAAGAACTATGTAAGCCGTCAGAAAGCCCGTTTGAGTAAAGCTGTAAACAGTATAAAATAA
PROTEIN sequence
Length: 88
MPNIKSQKKRSITNIKRNAAVKAQKSELKSLIKNVLLAVEANDNEKAVATYNEVSSKLDKSITSNIHHKNYVSRQKARLSKAVNSIK*