ggKbase home page

RifSed_csp2_16ft_3_scaffold_3263_1

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 244..1638

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction modification DNA specificity domain protein Tax=Enterobacteriaceae RepID=J5V1W6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 457.0
  • Bit_score: 369
  • Evalue 4.80e-99
Uncharacterized protein {ECO:0000313|EMBL:KGE73284.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 459.0
  • Bit_score: 370
  • Evalue 1.80e-99
restriction endonuclease subunit S similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 453.0
  • Bit_score: 328
  • Evalue 2.00e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirochaeta sp. JC230 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAACGCAGGCGCGCCCGCCCGCAGGTGGAAGCCCTACCCTGCATATAAGGATTCGGGCGTGGAGTGGCTGGGGAAGGTGCCGGAGCAATGGAAAGTCTTGAAACTTAAACACATCGTGAAAGTTAATTTAAGTAATGTGGACAAGAAAACAAACGAAGGTGAGGAAAATGTTAAACTATGCAATTATATTGATGTTTACTACAACGACTGCATAACCCCTGACCTCGATTTCATGCAAGCTACGGCTTCGGCTAATCAGATAGATAGATTTGCATTGAGAGAGGGGGATGTAATCATAACAAAAGATTCTGAGAGTTGGGAGGATATCGCTGTTCCTGCATATGTCCCTGCTGACCTGAATGGTGTTATTTGCGGTTATCATCTTGCGCATATTCGGCCGAATTATTCGCATATTAATGGAGAGTATTTATTTTGGTCGCTTTGTGCTCCTCGCCTAAATCATCAATTCAGAGTTGAAGCCCATGGTATAACTCGATTTGGGTTGGGAAAAGATTGTATTGACAACTCACTATTCCTTGTGCCACCGATAAATGAACAAAAATCCATCGCCTCCTTCCTCGACCGCCAGACCGCTCATCTCGACGCCCTCATCTCCAAAAAAGAGCGCCTCATCGACCTGCTCGAAGAAAAGCGCGCCGCTCTGATCAGCCGCGCGGTGACGAAGGGGCTTGATCCGGATGTGCGGATGAAGGATTTTGGGGTGGAATGGCTGGGGGAGGTGCCGGACCATTGGAATTTAAAGAAACTTAAGTATGCAGCGGTGTTTTTTGGTGGCGGTACGCCATCCAAAGATATCATCGAATATTGGTCGGGGAATATCCCATGGGTTTCGCCCAAGGATATGAAATCCGAATTAATAAATGATGCGGAAGACCACATAAACGAAGAAGCCGTGAAAAATAGTGCAACTGTCGTTATCGATTCTGGAGCCGTAATAATTGTTGCACGTTCGGGTATTCTGAAGCATACGATTCCCGTGGCTATTAATATTCGCCCATTGGCATTAAATCAGGATATGAAAGCAATGGTTCCAAAGGCAATTTTGAAATCAGATTATCTTGCCTATGTAATCCGTGGTTATCAATCAGCTCTTCTAGTTGAATGGAGGAAAGCTGGCGCCACTGTAGAAAGTATAGAGCATGAGTTACTTGTAAATACCTTTTTTCCACTGCCAACGCTCTCCGAACAGCACGCTATCGCCTCCTTCCTCGACCGCGAGACCGCGCGCATCGACGCTCTCATTTCGAAGGTCAGGGAGGGCATCGAAAAGCTACGTGAGTATCGCGCGGGGCTTATTTCGGCTGCGGTGACGGGAAAGATAGATGTGCGGGAGGCAGTGTCAGGATTTCAGGCGCATTCAGACAAATTATAA
PROTEIN sequence
Length: 465
MNAGAPARRWKPYPAYKDSGVEWLGKVPEQWKVLKLKHIVKVNLSNVDKKTNEGEENVKLCNYIDVYYNDCITPDLDFMQATASANQIDRFALREGDVIITKDSESWEDIAVPAYVPADLNGVICGYHLAHIRPNYSHINGEYLFWSLCAPRLNHQFRVEAHGITRFGLGKDCIDNSLFLVPPINEQKSIASFLDRQTAHLDALISKKERLIDLLEEKRAALISRAVTKGLDPDVRMKDFGVEWLGEVPDHWNLKKLKYAAVFFGGGTPSKDIIEYWSGNIPWVSPKDMKSELINDAEDHINEEAVKNSATVVIDSGAVIIVARSGILKHTIPVAINIRPLALNQDMKAMVPKAILKSDYLAYVIRGYQSALLVEWRKAGATVESIEHELLVNTFFPLPTLSEQHAIASFLDRETARIDALISKVREGIEKLREYRAGLISAAVTGKIDVREAVSGFQAHSDKL*