ggKbase home page

RifSed_csp2_16ft_3_scaffold_4926_8

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(7778..8185)

Top 3 Functional Annotations

Value Algorithm Source
Putative nucleic-acid-binding protein containing a Zn-ribbon Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L279_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 128.0
  • Bit_score: 190
  • Evalue 8.90e-46
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:KCZ72154.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 133.0
  • Bit_score: 233
  • Evalue 9.90e-59
putative nucleic-acid-binding protein containing a Zn-ribbon similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 128.0
  • Bit_score: 190
  • Evalue 2.50e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 408
ATGTCTGTACCAAGATTCTGGAGAAGGCTCAAGAACGTCTACAATCTCATCGGCACGCAATGTGAAAATTGCGGAATGTATTATTATCCTCCCAGGAGCCTGTGTCCCAAATGCAGGAGGAGCAGTCTCATCATTCCTTTCAAGTTCAAAGGAGAGGGCGAGGTGCTGACCTACACCATCGTTCACAGCGCGACAAAAGATTTCGAGAAGCATGTGCCTTATATCCTTGCCATAATCAAACTGAATGAGGGTCCAAACCTTACTTCGCAGGTGATCTGTTCACCTGAGGAGATCCATATAGGTATGAAGGTGAAGTCCGTGTTCAGGAAGCTTGGAGAGGAAAGCGAGAAAGGCATGATTTATTACGGCACGAAGTTTGTGCCTTTATTGAACCATTCTGGCAAATAA
PROTEIN sequence
Length: 136
MSVPRFWRRLKNVYNLIGTQCENCGMYYYPPRSLCPKCRRSSLIIPFKFKGEGEVLTYTIVHSATKDFEKHVPYILAIIKLNEGPNLTSQVICSPEEIHIGMKVKSVFRKLGEESEKGMIYYGTKFVPLLNHSGK*