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RifSed_csp2_16ft_3_scaffold_4926_11

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(10445..11230)

Top 3 Functional Annotations

Value Algorithm Source
HTH DNA-binding domain protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR4_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 239.0
  • Bit_score: 288
  • Evalue 6.10e-75
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72151.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 261.0
  • Bit_score: 441
  • Evalue 6.00e-121
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 239.0
  • Bit_score: 288
  • Evalue 1.70e-75

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 786
ATGACAGATAATGCAGCCATTGCCTCATCGCCTGCTCCGCCAGCTTCAGGTCTGAACTCGATCTACGAAAATCTGAGGTATAAGCTTGCTGAAAAAATGGCAGGTGAAATAACGCTCTCTGATAATCCGGGCGAGACGCTGAAAAAATGGCGCACGGTTTTTGAGATCTCTCAATCCGATCTCGCGGCGTTTCTTAAAGTTTCGCCTTCCGTGATAAGCGATTATGAAAGCGGAAGGAGGAAATCCCCTGGTATTTTTATCGTGAGCAGAATAGTTGATGCTATCCTGGACATGGATGTTACACGGGGGGGTGCTAAGATACGCTCGTATGAAGGAATAATGCGCGGGGATTTCAGTGCAGATGCAATTTATGATATTCATGAGTACCTCTCCCCAATTTCAGTGGAAGAGGTAACGAAATTGATCGGCGGAGAGGTGGTTTACACTCCAGGAAGTGAATTCATAAAACCGCTGTACGGGTATACTATAATAGACAGCATAAAGGCAATTCTCCAGCTATCGTACAATGAATTTCTGAAACTGTACGGATGGAGTTCAGAGAGAGCTATGGTTTTCACCAATGTCTCCACAGGACGCTCACCGATGGTGGCTCTCAGAGTGACAAACTTAAAACCCGCTCTTGTCGTGATCCACGGGCTTCCAGCTGCCCAGATTGATCCGATAGCAGCAAAGATCGCAGAGATAGAGCGTGTACCAATGATCACTTCTGTCATGCCTATTAGAGACATTATTCGTGCGCTTGAATCGCACGATATAAAGCATTAA
PROTEIN sequence
Length: 262
MTDNAAIASSPAPPASGLNSIYENLRYKLAEKMAGEITLSDNPGETLKKWRTVFEISQSDLAAFLKVSPSVISDYESGRRKSPGIFIVSRIVDAILDMDVTRGGAKIRSYEGIMRGDFSADAIYDIHEYLSPISVEEVTKLIGGEVVYTPGSEFIKPLYGYTIIDSIKAILQLSYNEFLKLYGWSSERAMVFTNVSTGRSPMVALRVTNLKPALVVIHGLPAAQIDPIAAKIAEIERVPMITSVMPIRDIIRALESHDIKH*