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SR-VP_26_10_2019_C_40cm_scaffold_63

Search features with annotation key words

Displaying items 61-90 of 243 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_63_59
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(50678..51268)
DNA (591bp) protein (197aa)
Putative integral membrane sensor protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RG99_METP4
Uncharacterized protein {ECO:0000313|EMBL:KKG10209.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
putative integral membrane sensor protein
SR-VP_26_10_2019_C_40cm_scaffold_63_60
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(51497..52309)
DNA (813bp) protein (271aa)
Uncharacterized protein id=3327352 bin=GWC1_Spirochaetes_27_15 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
Tax=GWD1_Spirochaetes_27_9_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_61
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(52812..53849)
DNA (1038bp) protein (346aa)
Digeranylgeranylglycerophospholipid reductase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYN0_METPS
Geranylgeranyl reductase family protein {ECO:0000313|EMBL:KCZ73433.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
geranylgeranyl reductase
SR-VP_26_10_2019_C_40cm_scaffold_63_62
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(53834..54577)
DNA (744bp) protein (248aa)
Lipoate-protein ligase A {ECO:0000313|EMBL:KCZ73434.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KCZ73434.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
lipoate-protein ligase A (EC:2.7.7.63)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=5240860 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
SR-VP_26_10_2019_C_40cm_scaffold_63_63
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(54579..54878)
DNA (300bp) protein (100aa)
Lipoate-protein ligase A n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TG70_THEC1
Bacterial lipoate protein ligase C-terminus {ECO:0000313|EMBL:KCZ73435.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Lipoate-protein ligase A
SR-VP_26_10_2019_C_40cm_scaffold_63_64
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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54962..55870
DNA (909bp) protein (303aa)
ATP-dependent protease La Type I (EC:3.4.21.53)
ATP-dependent protease La Type I {ECO:0000313|EMBL:AKB75423.1}; EC=3.4.21.53 {ECO:0000313|EMBL:AKB75423.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
Archaeal serine protease n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWA8_METHD
SR-VP_26_10_2019_C_40cm_scaffold_63_65
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

55918..57321
DNA (1404bp) protein (468aa)
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:KCZ72660.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KCZ72660.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NAD(FAD)-dependent dehydrogenase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2M6_9ARCH
dehydrogenase
SR-VP_26_10_2019_C_40cm_scaffold_63_66
unknown

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57453..57632
DNA (180bp) protein (60aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_67
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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57962..58915
DNA (954bp) protein (318aa)
Radical SAM domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1K7_FERPA
radical SAM domain-containing protein
Tax=RBG_16_Zixibacteria_43_9_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_68
unknown

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58922..59842
DNA (921bp) protein (307aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_63_69
unknown

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comp(59877..60557)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D68F85
SR-VP_26_10_2019_C_40cm_scaffold_63_70
unknown

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comp(60562..61032)
DNA (471bp) protein (157aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_63_71
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(61039..61785)
DNA (747bp) protein (249aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=PYRK_METMA
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_63_72
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(61782..62672)
DNA (891bp) protein (297aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
dihydroorotate dehydrogenase 1B (EC:1.3.3.1)
Dihydroorotate dehydrogenase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM9_METBU
SR-VP_26_10_2019_C_40cm_scaffold_63_73
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(62764..63480)
DNA (717bp) protein (239aa)
O-methyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UN21_MYXSD
Putative O-methyltransferase {ECO:0000313|EMBL:KCZ70285.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
O-methyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_63_74
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(63593..63850)
DNA (258bp) protein (86aa)
MtN3 and saliva related transmembrane protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FKE4_9EURY
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_75
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(63883..64473)
DNA (591bp) protein (197aa)
Tax=RBG_13_Chloroflexi_50_10_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_trna_6
unknown

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comp(64787..64861)
DNA (75bp)
transferRNA Met
SR-VP_26_10_2019_C_40cm_scaffold_63_trna_5
unknown

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comp(64885..64957)
DNA (73bp)
transferRNA Asn
SR-VP_26_10_2019_C_40cm_scaffold_63_76
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(65021..65329)
DNA (309bp) protein (103aa)
Cupin domain-containing protein {ECO:0000313|EMBL:KCZ73261.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cupin 2 conserved barrel domain protein id=3738594 bin=GWF2_Planctomycetes_42_9 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
cupin 2 conserved barrel domain-containing protein
SR-VP_26_10_2019_C_40cm_scaffold_63_77
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(65345..65806)
DNA (462bp) protein (154aa)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ribC; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPT8_METAC
SR-VP_26_10_2019_C_40cm_scaffold_63_78
unknown

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66020..66148
DNA (129bp) protein (43aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_63_79
unknown

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66437..67384
DNA (948bp) protein (316aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_63_80
unknown

Not on your lists

67459..68178
DNA (720bp) protein (240aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_81
unknown

Not on your lists

68180..68545
DNA (366bp) protein (122aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_82
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

68631..70202
DNA (1572bp) protein (524aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KCZ72990.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KCZ72990.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLP8_METZD
SR-VP_26_10_2019_C_40cm_scaffold_63_83
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

70245..70430
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71485.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_63_84
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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70746..72521
DNA (1776bp) protein (592aa)
type I restriction endonuclease subunit M n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B37500
type I restriction modification enzyme, subunit M
Type I restriction modification system subunit M {ECO:0000313|EMBL:BAM70105.1}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter sp. CaT2.;"
SR-VP_26_10_2019_C_40cm_scaffold_63_85
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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72522..73565
DNA (1044bp) protein (348aa)
Putative uncharacterized protein id=1980682 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=GWB2_Nitrospirae_47_37_curated
SR-VP_26_10_2019_C_40cm_scaffold_63_86
unknown

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73565..74029
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying items 61-90 of 243 in total

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