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CG10_big_fil_rev_8_21_14_0_10_Nealsonbacteria_36_23_curated

CG10_big_fil_rev_8_21_14_0_10_Bacteria_36_1
In projects: CG10_big_fil_rev_8_21_14_0_10  |  CG_2014_genomes_from_metagenomes  |  cpr-dpann-all  |  cpr_cg

Consensus taxonomy: Bacteria

Displaying 40 items
contig # features sequence size GC content (%) Cov Coding Density (%)
CG10_big_fil_rev_8_21_14_0.10_scaffold_2086_c
Domain: Bacteria (79.41%)
35 23011 bp 37.40 1.00 84.62
CG10_big_fil_rev_8_21_14_0.10_scaffold_4586_c
Domain: Bacteria (77.27%)
35 21106 bp 37.68 1.00 86.10
CG10_big_fil_rev_8_21_14_0.10_scaffold_2720_c
Domain: Bacteria (72%)
31 27324 bp 36.73 1.00 93.43
CG10_big_fil_rev_8_21_14_0.10_scaffold_4260_c
Domain: Bacteria (74.07%)
27 24382 bp 35.43 1.00 87.09
CG10_big_fil_rev_8_21_14_0.10_scaffold_2789_c
Domain: Bacteria (64%)
27 18027 bp 35.50 1.00 84.35
CG10_big_fil_rev_8_21_14_0.10_scaffold_2952_c
Domain: Bacteria (82.35%)
17 17539 bp 36.63 1.00 98.35
CG10_big_fil_rev_8_21_14_0.10_scaffold_10741_c
Domain: Bacteria (80%)
17 16991 bp 35.78 1.00 84.86
CG10_big_fil_rev_8_21_14_0.10_scaffold_8235_c
Domain: Bacteria (85.71%)
17 13926 bp 37.97 1.00 71.71
CG10_big_fil_rev_8_21_14_0.10_scaffold_11625_c
Domain: Bacteria (86.67%)
16 11747 bp 36.83 1.00 87.64
CG10_big_fil_rev_8_21_14_0.10_scaffold_10921_c
Domain: Bacteria (76.92%)
16 13386 bp 35.82 1.00 93.80
CG10_big_fil_rev_8_21_14_0.10_scaffold_6818_c
Phylum: Parcubacteria (50%)
14 14704 bp 37.77 1.00 60.35
CG10_big_fil_rev_8_21_14_0.10_scaffold_7543_c
Phylum: Parcubacteria (53.85%)
13 17579 bp 36.15 1.00 91.98
CG10_big_fil_rev_8_21_14_0.10_scaffold_13941_c
Domain: Bacteria (58.33%)
13 15155 bp 37.27 1.00 84.53
CG10_big_fil_rev_8_21_14_0.10_scaffold_6066_c
Class: RIF-OD1-7 (50%)
13 11353 bp 36.47 1.00 84.28
CG10_big_fil_rev_8_21_14_0.10_scaffold_4144_c
Domain: Bacteria (76.92%)
13 14344 bp 35.88 1.00 92.82
CG10_big_fil_rev_8_21_14_0.10_scaffold_21605_c
Phylum: Parcubacteria (50%)
12 7787 bp 35.53 1.00 86.34
CG10_big_fil_rev_8_21_14_0.10_scaffold_9313_c
Domain: Bacteria (70%)
11 8575 bp 37.31 1.00 85.70
CG10_big_fil_rev_8_21_14_0.10_scaffold_46947_c
Class: Wolfebacteria (54.55%)
11 6270 bp 32.28 1.00 79.67
CG10_big_fil_rev_8_21_14_0.10_scaffold_34509_c
Domain: Bacteria (60%)
10 8126 bp 32.18 1.00 96.76
CG10_big_fil_rev_8_21_14_0.10_scaffold_20069_c
Phylum: CG_CPR10 (55.56%)
10 6385 bp 34.33 1.00 91.78
CG10_big_fil_rev_8_21_14_0.10_scaffold_18419_c
Species: CG_CPR10_01 (50%)
10 8681 bp 36.68 1.00 91.92
CG10_big_fil_rev_8_21_14_0.10_scaffold_12215_c
Domain: Bacteria (70%)
10 7118 bp 32.99 1.00 85.14
CG10_big_fil_rev_8_21_14_0.10_scaffold_6526_c
Class: RIF-OD1-7 (66.67%)
9 12344 bp 34.93 1.00 91.09
CG10_big_fil_rev_8_21_14_0.10_scaffold_6866_c 9 10490 bp 35.09 1.00 96.75
CG10_big_fil_rev_8_21_14_0.10_scaffold_17588_c
Phylum: Parcubacteria (66.67%)
9 5357 bp 34.78 1.00 77.56
CG10_big_fil_rev_8_21_14_0.10_scaffold_12632_c
Domain: Bacteria (87.5%)
8 7565 bp 35.44 1.00 91.41
CG10_big_fil_rev_8_21_14_0.10_scaffold_13443_c
Phylum: Microgenomates (71.43%)
7 7121 bp 39.94 1.00 95.42
CG10_big_fil_rev_8_21_14_0.10_scaffold_54239_c
Phylum: Microgenomates (85.71%)
7 5261 bp 37.07 1.00 88.79
CG10_big_fil_rev_8_21_14_0.10_scaffold_58841_c
Phylum: Microgenomates (100%)
7 7702 bp 36.85 1.00 99.95
CG10_big_fil_rev_8_21_14_0.10_scaffold_6660_c
Species: GWA2_OP11_42_12 (50%)
6 10650 bp 40.29 1.00 97.32
CG10_big_fil_rev_8_21_14_0.10_scaffold_19499_c
Class: RIF-OD1-7 (50%)
6 5298 bp 33.05 1.00 96.66
CG10_big_fil_rev_8_21_14_0.10_scaffold_17849_c
Phylum: Parcubacteria (60%)
5 5481 bp 34.90 1.00 98.69
CG10_big_fil_rev_8_21_14_0.10_scaffold_13492_c
Phylum: Microgenomates (80%)
5 6648 bp 41.58 1.00 97.16
CG10_big_fil_rev_8_21_14_0.10_scaffold_19446_c
Phylum: CG_CPR10 (60%)
5 5131 bp 31.81 1.00 92.96
CG10_big_fil_rev_8_21_14_0.10_scaffold_20209_c 5 5343 bp 34.61 1.00 87.25
CG10_big_fil_rev_8_21_14_0.10_scaffold_16046_c
Domain: Bacteria (100%)
5 5916 bp 35.62 1.00 85.45
CG10_big_fil_rev_8_21_14_0.10_scaffold_13928_c
Phylum: Microgenomates (75%)
4 8858 bp 33.77 1.00 97.44
CG10_big_fil_rev_8_21_14_0.10_scaffold_21492_c
Species: marine sediment metagenome (66.67%)
3 4799 bp 34.49 1.00 96.33
CG10_big_fil_rev_8_21_14_0.10_scaffold_20648_c
Species: GWB1_OD1_41_12 (66.67%)
3 4930 bp 35.62 1.00 100.35
CG10_big_fil_rev_8_21_14_0.10_scaffold_25999_c
Species: Microgenomates bacterium GW2011_GWC1_41_20 (50%)
2 4146 bp 40.16 1.00 97.40
Displaying 40 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.