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CG1_02A_UNK

In projects: CG1_02A
Displaying items 1-50 of 306 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cg1_0.2A_scaffold_1238
Species: CG_Proteo_01 (100%)
1 5612 bp 65.25 14.75 75.48
cg1_0.2A_scaffold_1506
Species: GWA1_OP11_41_13b (100%)
1 5092 bp 44.19 10.75 97.33
cg1_0.2A_scaffold_1280
Species: GWA2_OD1_43_9 (100%)
1 5523 bp 39.89 8.12 27.10
cg1_0.2A_scaffold_1069
Species: CG_Proteo_01 (100%)
1 6026 bp 62.33 15.91 98.47
cg1_0.2A_scaffold_1330
Species: GWC2_WWE3_44_9 (100%)
1 5423 bp 44.55 11.17 88.90
cg1_0.2A_scaffold_567
Species: CG_Proteo_01 (100%)
1 8725 bp 64.44 14.51 96.14
cg1_0.2A_scaffold_1197
Species: RBG_16_RIF_WS3X_71_46_curated (100%)
1 5702 bp 54.56 12.00 98.60
cg1_0.2A_scaffold_954
Species: Phaeodactylum tricornutum (100%)
1 6331 bp 44.38 6.94 61.22
cg1_0.2A_scaffold_489
Species: CG_Proteo_01 (100%)
2 9795 bp 61.87 16.05 98.47
cg1_0.2A_scaffold_1526
Species: Altiarchaeum hamiconexum (100%)
2 5054 bp 34.03 22.97 89.22
cg1_0.2A_scaffold_1068
Species: Leptolyngbya sp. PCC 7375 (50%)
2 6027 bp 58.57 9.13 92.63
cg1_0.2A_scaffold_844
Species: Altiarchaeum hamiconexum (100%)
2 6834 bp 33.52 24.93 95.96
cg1_0.2A_scaffold_613
Species: CG_Levy_01 (50%)
2 8006 bp 43.57 10.06 47.06
cg1_0.2A_scaffold_1138
Species: CG_Pacearch_06 (100%)
2 5829 bp 31.10 6.33 83.38
cg1_0.2A_scaffold_917
Species: Xanthomonas citri (100%)
2 6483 bp 56.12 8.45 90.33
cg1_0.2A_scaffold_951
Species: CG_Levy_01 (100%)
2 6346 bp 40.32 9.81 27.37
cg1_0.2A_scaffold_1213
Species: CG_Pacearch_06 (50%)
2 5667 bp 48.61 27.21 90.42
cg1_0.2A_scaffold_1218
Species: CG_Proteo_01 (66.67%)
3 5657 bp 64.17 14.27 72.44
cg1_0.2A_scaffold_754
Phylum: Proteobacteria (100%)
3 7405 bp 52.61 13.53 89.17
cg1_0.2A_scaffold_1534
Species: CG_Gallio_02 (100%)
3 5041 bp 57.87 11.28 88.49
cg1_0.2A_scaffold_1554
Phylum: Proteobacteria (100%)
3 5013 bp 53.50 15.47 95.27
cg1_0.2A_scaffold_1561
Species: CG_Elusi_05 (100%)
3 5010 bp 36.83 5.42 77.54
cg1_0.2A_scaffold_1636
Species: CG_Proteo_01 (100%)
3 6612 bp 64.29 14.20 98.14
cg1_0.2A_scaffold_804
Species: CG_Thiomicrospira_01 (100%)
3 7223 bp 42.99 37.13 91.54
cg1_0.2A_scaffold_1075
Species: CG_Hydro_01 (100%)
3 6007 bp 55.34 14.08 85.15
cg1_0.2A_scaffold_1091
Species: CG_Gallio_02 (100%)
3 5964 bp 63.01 13.00 88.78
cg1_0.2A_scaffold_1347
Species: R_OD1_Azambacteria_40_24 (66.67%)
3 5384 bp 44.61 9.19 79.57
cg1_0.2A_scaffold_1099
Species: CG_Elusi_05 (100%)
3 5941 bp 34.64 7.73 76.81
cg1_0.2A_scaffold_1371
Species: R_RIF_OD1_09_44_41 (66.67%)
3 5332 bp 43.55 6.05 53.68
cg1_0.2A_scaffold_1397 3 5283 bp 40.00 9.09 13.57
cg1_0.2A_scaffold_1419 3 5234 bp 41.19 7.51 12.04
cg1_0.2A_scaffold_1430
Species: CG_Pacearch_06 (66.67%)
3 5214 bp 36.71 8.37 61.74
cg1_0.2A_scaffold_1449
Species: Altiarchaeum hamiconexum (66.67%)
3 5176 bp 34.62 11.33 89.26
cg1_0.2A_scaffold_1477
Species: CG_Levy_01 (100%)
4 5135 bp 39.36 10.19 91.72
cg1_0.2A_scaffold_989
Species: CG_Elusi_05 (100%)
4 6220 bp 35.95 7.09 93.81
cg1_0.2A_scaffold_1519
Species: mine drainage metagenome (50%)
4 5065 bp 49.24 7.08 74.93
cg1_0.2A_scaffold_1522
Class: Betaproteobacteria (50%)
4 5063 bp 46.57 8.56 43.91
cg1_0.2A_scaffold_1011
Phylum: Parcubacteria (50%)
4 6175 bp 34.33 12.44 76.28
cg1_0.2A_scaffold_1528
Species: Rhodanobacter sp. 115 (50%)
4 5051 bp 44.74 8.61 88.38
cg1_0.2A_scaffold_1017
Species: Pseudomonas chlororaphis (50%)
4 6161 bp 61.40 17.77 90.96
cg1_0.2A_scaffold_1020
Species: CG_Hydro_01 (100%)
4 6157 bp 53.03 10.99 77.72
cg1_0.2A_scaffold_1532
Species: CG_Gallio_01 (100%)
4 5042 bp 51.13 62.77 85.80
cg1_0.2A_scaffold_1537
Species: CG_Elusi_05 (100%)
4 5037 bp 39.71 8.73 91.72
cg1_0.2A_scaffold_1284
Species: CG_Omnitr_02 (50%)
4 5519 bp 37.49 7.45 51.64
cg1_0.2A_scaffold_1290
Species: CG_Elusi_05 (100%)
4 5506 bp 37.80 6.87 83.25
cg1_0.2A_scaffold_1294
Species: CG_GN02-01 (100%)
4 5502 bp 39.62 7.85 54.47
cg1_0.2A_scaffold_1295
Species: RBG_16_Betaproteobacteria_58_11_curated (75%)
4 5498 bp 51.93 10.39 84.63
cg1_0.2A_scaffold_1563
Species: Nitrosococcus oceani (50%)
4 5006 bp 47.64 9.95 90.07
cg1_0.2A_scaffold_1645
Genus: Pseudomonas (50%)
4 5090 bp 54.36 14.82 74.97
cg1_0.2A_scaffold_808
Species: GWF2_Lentisphaerae_44_16_curated (50%)
4 6985 bp 39.90 6.38 93.11
Displaying items 1-50 of 306 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.