ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

cg1_0.2A_scaffold_164_6

Organism: CG1_02A_Bin9

partial RP 29 / 55 MC: 1 BSCG 30 / 51 ASCG 13 / 38
Location: comp(4718..5719)

Top 3 Functional Annotations

Value Algorithm Source
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2) Tax=CG_Nomura_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 333.0
  • Bit_score: 636
  • Evalue 1.60e-179
Tryptophan--tRNA ligase id=1889104 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 324.0
  • Bit_score: 264
  • Evalue 2.10e-67
tryptophan--tRNA ligase similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 333.0
  • Bit_score: 171
  • Evalue 5.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Nomura_04 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGACAATACACAAAACAACTGAAAAACAGAATGTCATTATAACCGGCGTCAGACCGTCGGCGAATTTGACTGTGGCAAATTTTGTCGGGTCGGTCATACCGCTCCTCGATCTTCAGAATGAGGGTCGTCCGATATCGGCGTTCGTGGCAACCATGCACGGACTTACCGACCGGGAACCCTCCGAGATCGTACCAAATGTAATCGAGGTCGTGCGCGATTATCTGGCGCTCGGGCTTGACCCGAAAAAAGTAATTATGTTCGATCAACGAGCCGTACGCAAGGAGGTGGCGCTTCTGAAGCTCTATCTCGAACGACACATTACCATCGCGCGACTGTTGCGTGTTCCCGCGCTCAAAGACAAACTGCGCGAAGGACAAACGGCCGAGCAGGCAAGCGCCTTGCTTGCCGAATACCCTATCATGATGGCAGTGGACATCTTGCTCCAAGATGCGAACCTTGTTCCTGTCGGCAAAGATCAGTATGCGCATATTGAAGCGACCAAAGAGCTCGCGCGAGCATTCAACGCACGGTATGGCGACACGCTCGTTGTCCCCGAAGTGCTCGAACGTAATGAGCCAGTGAACATCCTCGCGCTTCGCGGTGACGGCAAAATGTCAAAGAGCAAACCGGATGATGCAATCTTCCTCACCGACAACGAAGAGACGCTTCGTAAAAAAATCAAGCAGGCTGAGACCGCCGACCCGGGGAAGAAATCGGAGAAGATCGAAAGTCTCGCGTTTTTGGGACGAATACTTTCACCTGCTCGAGCATCGGATATTGATGCGATTCTTACGCGACACCGTGCAGGTAATAAAGTGATGGCGGATTTTAAGGAAATACTCGCCGACATCGTCGTCACCTTTACTACTGATTTTCAAAAAAAACGCGCGGATGTTTCAACGAGTTCTGTTCAGAATATCCTTGTGGATGGAAACGAGATCGCGCTTACACAAGCCAAAACAGTACTTGATCGCGCAGAACACGCGATGAGGATCATATAA
PROTEIN sequence
Length: 334
MTIHKTTEKQNVIITGVRPSANLTVANFVGSVIPLLDLQNEGRPISAFVATMHGLTDREPSEIVPNVIEVVRDYLALGLDPKKVIMFDQRAVRKEVALLKLYLERHITIARLLRVPALKDKLREGQTAEQASALLAEYPIMMAVDILLQDANLVPVGKDQYAHIEATKELARAFNARYGDTLVVPEVLERNEPVNILALRGDGKMSKSKPDDAIFLTDNEETLRKKIKQAETADPGKKSEKIESLAFLGRILSPARASDIDAILTRHRAGNKVMADFKEILADIVVTFTTDFQKKRADVSTSSVQNILVDGNEIALTQAKTVLDRAEHAMRII*