ggKbase home page

cg1_0.2_scaffold_6563_c_2

Organism: CG1_02_FULL_Parcubacteria_OD1_44_65_curated

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 4
Location: 1540..2718

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=uncultured bacterium RepID=K2EJG7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 412.0
  • Bit_score: 475
  • Evalue 5.30e-131
  • rbh
RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=CG_CPR01_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 392.0
  • Bit_score: 758
  • Evalue 3.40e-216
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 360.0
  • Bit_score: 398
  • Evalue 3.00e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_CPR01_01 → CG_CPR01 → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCCCACTAAAAAAAAGAAGGTGCCTAAAACAAACAAAAAAAGAACCGAAGTCGTTCGCCTTAAAACGGCGCCAAAGAAAAAACCGTCAGTTAGAAGGAAAAAAAAACCGATTAGCGAAGAGAAAATCCAGCAACTGGTCAATCGCGGGCGAGAAAGGGGATTTGTCACTGAATCGGAACTGCTCAACCTTATCCCCAGGATAGAAGATGATATTTCCGGCTTGGAAAAAACATATGAACGGCTAAGAGAAAACAATATTGATATTATTGAGTCAATCGAGTTTTTAAAAGAGCCGGCCGAAGTCAAAGATGGCAAGAAAAAAACAGACAAGATTCCTTTTCGCCTGGAGGCCTTTGACAATGTTCAAATGTATTTGAGGGAAATCGGCCGGATACCCTTAATTAACGCTCAAGAAGAAGTCCGATTGGCCAAAAAAATAGAGCAGGGAGACGAAGAGGCGAAACAAAAACTGACTCAAGCCAATCTGCGCTTGGTTGTCAGTATCGCCAAAAAATATGTTAACCGGAGCCGCAATTTGGCTCTATTAGACCTTATTCAGGAAGGAAACATCGGATTATTCAAGGCGGTAGAGAAATTTGATTACCATCGGGGATATAAATTCTCCACCTATGCTACCTGGTGGATCCGCCAGGCGGTAACGCGCGCCCTGGCTGACCAATCAAGGACTATCAGAATACCAGTCCATATGGTAGAAACTATCAGCCGGTTTACCCAAGCTAAAAGGCGGCTAATCCAAAATCTGGGACGGGAACCCTTACCGGAAGAAATCGCCGCTGAGATGAAAGAACCGATTGAAAAAATCCGCCAAATTATCAAAATTTCGCAAGAAACAATTTCTTTGGAAACACCCGTCGGCGACGATAGCGAAGAAAGCATGTTAGGGGAATTCATTGAGGATAAAAAAACCGCCGGTCCGACCCAAGTTGCTTCCCGAAAACTGCTTCGCAAACGGCTCAACGAAATTCTGTATGATTTGTCTCCGCGGGAACAAAAGATCTTAGAAATGCGTTTCGGTTTGAAAGACAGCATCACTCATACGCTTGAAGAAGTCGGCAAAGAATTTGGAGTTACTCGGGAAAGAATCCGCCAAATTGAGGCCAAGGCGCTGGAAAAAATGCGTCAGCATAAATCATCCGAGAAATTAAAAGGGTATTGA
PROTEIN sequence
Length: 393
MPTKKKKVPKTNKKRTEVVRLKTAPKKKPSVRRKKKPISEEKIQQLVNRGRERGFVTESELLNLIPRIEDDISGLEKTYERLRENNIDIIESIEFLKEPAEVKDGKKKTDKIPFRLEAFDNVQMYLREIGRIPLINAQEEVRLAKKIEQGDEEAKQKLTQANLRLVVSIAKKYVNRSRNLALLDLIQEGNIGLFKAVEKFDYHRGYKFSTYATWWIRQAVTRALADQSRTIRIPVHMVETISRFTQAKRRLIQNLGREPLPEEIAAEMKEPIEKIRQIIKISQETISLETPVGDDSEESMLGEFIEDKKTAGPTQVASRKLLRKRLNEILYDLSPREQKILEMRFGLKDSITHTLEEVGKEFGVTRERIRQIEAKALEKMRQHKSSEKLKGY*