ggKbase home page

cg1_0.2_scaffold_1137_c_6

Organism: CG1_02_FULL_Alphaproteobacteria_46_17_curated

near complete RP 53 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38 MC: 1
Location: 6319..8766

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AN98_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 643.0
  • Bit_score: 825
  • Evalue 5.60e-236
  • rbh
rpoD; RNA polymerase sigma factor (sigma70) Tax=CG_Alphaprot_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 815.0
  • Bit_score: 1579
  • Evalue 0.0
rpoD; RNA polymerase sigma factor (sigma70) similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 643.0
  • Bit_score: 825
  • Evalue 1.60e-236

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Alphaprot_01 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2448
ATGGCGGCAAAAAAGCAACCGAAAACACCTACGAAACCAGCAGGCAAGGGAAAACCGGCAAGCAAGGAGGCGTCTAAGATCGCGCCTTCAAAAGCCAAATCCGCCAAAGTGGCAGAGAAAGCAAAGGCCCCTGCAAAAAAGGCAGTGGCGAAGAAAGACACGAAAACCGTAGTGTCAAAGCCCACAAAGAAAGCGGATGTTAAGAATTCCGCTCCGAAAAAAATAGAACAAACAAAAACGCCCAAAGCCAAAGAAGCGACCAAGGCGACCCATAAGACAAAAGAGACAACCGCAAAAAGCGCAATAGAAAAACAGACAGAAAAAATGCCAAAAACCAAAACGGCCACAAAAGAAAAAACAGTTAAAGTAGAGACGGTAGAAAAAGAACTTCCGATCGCACCTGCAAAGAAAAAAGAAGGCGTTAAAAAAGCCTCTTCCAAAACAAAAGAAAAATCGATGGCCGATAAGAAGCCTCCGGCAGAGTTGGCCATTACAACCGGTCAAAAAGGCAATCTTGAAAAAATCGTCAAGAAACTGATTTCCAAAGGCAAAGAGCAAGGTTATGTTACCTATGATGACCTGAACAATCTGCTGCCCGCTGAAGAATTTTCGTCGGATCAAATTGAAGACGCGATGTCCACAATCTCTGAAGCTGGTGTCCAACTGGTTGATAATGCCGATGACGCGAGCGATGAAGCCGAAGAGCCATCCAAAAAAGAATCCAGCGATGACGAGTATGAAAGCGGCGGGAACATCTCGGATGATGATACTGGCCGGACTGACGACCCTGTGCGGATGTATCTGCGCGAGATGGGAACCGTTGAATTGTTGTCCCGTGAAGGCGAGATCGCGATTGCCAAACGTATTGAGGCCGGTCGTGAAACCATGATCGGTGGTATTTGTGAAGCGCCTCTTGCGATTGAATCTATCATTGCGTGGTATGAAGCTTTGCTTAAAGGCGACATTCTGTTGCGCGAAGTGATCGATCTTGAAGCCACATATGGCGGAGATAATGCGTTTGATGGTTCTGGTGAAGCCGCACCAGTCAAGCCTGCTGTACCCATAGTTCCTGTCCTAAAGGAAAAGCCGAAAGAAAAAGTAAAAGACGGTAAATCCTCCGACGAAGAAACTGTAAGTCCGGATGGAGAAGACGGAGAAGATTCTTCCGGGGATGAGAATGATGAAAACTCATTGTCTCTGGCCGCGATGGAAGCCGAATTGGCACCGAAAGTTTTCCCGATTTTCGAACAGATCAAAAAAACCTATAAAAAATTGCAAAAGGCCCAGCACGAAAAAATCGAAGCAGGTAAAACTGCGCCAGCAGCAATCATTAAAAAATATGATGCAGTAAAACTGGAAATGGTCGGGCTTATGAATGAAGTCCGTCTGCATGCGGCTCGTATCGACCAGTTGATTGAACGTCTTTATAAAATGAACCGCGATCTGGTGTCATTGGAAGGCCGGATGATGCGTTTGGCAATCGATTGTGGTGTCACTCGTGAAATTTTCCTGAAACAATATGAAGACCACTTGCTGGTCGGAAACTGGAAATCTTCATCCAAGAACCTGAGCGGAAAAGGCTGGGATAAATTCTTTGAACGTCATACGACAGATGTCGAAGCCATTCGTGACCAGATTGATTCCATTGCTTCTGAATCCGGGCTGCCTCTTCTGGAATATAAACGTATTGTCTCGACCGTTCAAAAAGGTGACAAGGAATCCAATCGCGCGAAAAAAGAGATGATCGAGGCCAACTTGCGTCTCGTGATTTCGATTGCCAAAAAATATACCAACCGTGGCTTGCAGTTTCTTGACTTGATTCAAGAAGGCAACATCGGTCTGATGAAGGCGGTTGATAAATTCGAATATCGCCGTGGATACAAATTCTCGACCTATGCCACATGGTGGATCAGACAGGCCATTACGCGCTCAATTGCCGATCAGGCCCGCACCATCCGTATTCCGGTTCACATGATCGAGACTATTAACAAACTGGTTCGGACATCGCGTCAGATGATGCACGAAATTGGCCGTGAGCCAACACCAGAAGAGTTGGCGGTCCGTTTGCATATGCCACTTGATAAAGTGCGCAAAGTTTTGAAAATCGCCAAGGAACCGGTTTCGCTTGAAACGCCGATCGGAGACGAGGAAGATTCATCTCTCGGAGATTTCATTGAAGATAAAAACGCAATTCTTCCAGTTGAGAGTGCGATCCAGTCAAACCTGCGCGAAACCACCACGCGCGTTCTGGCAACACTCACTCCGCGTGAAGAACGTGTTCTGCGGATGCGTTTCGGGATCGGCATGAACACCGACCACACGCTGGAGGAAGTCGGGCAACAATTTAATGTGACCCGTGAGCGGATCAGACAGATTGAAGCCAAGGCGTTGAGAAAACTCAAGCACCCATCCAGAAGCCGTAAACTGCGTAGCTTTTTGGATACATAG
PROTEIN sequence
Length: 816
MAAKKQPKTPTKPAGKGKPASKEASKIAPSKAKSAKVAEKAKAPAKKAVAKKDTKTVVSKPTKKADVKNSAPKKIEQTKTPKAKEATKATHKTKETTAKSAIEKQTEKMPKTKTATKEKTVKVETVEKELPIAPAKKKEGVKKASSKTKEKSMADKKPPAELAITTGQKGNLEKIVKKLISKGKEQGYVTYDDLNNLLPAEEFSSDQIEDAMSTISEAGVQLVDNADDASDEAEEPSKKESSDDEYESGGNISDDDTGRTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGRETMIGGICEAPLAIESIIAWYEALLKGDILLREVIDLEATYGGDNAFDGSGEAAPVKPAVPIVPVLKEKPKEKVKDGKSSDEETVSPDGEDGEDSSGDENDENSLSLAAMEAELAPKVFPIFEQIKKTYKKLQKAQHEKIEAGKTAPAAIIKKYDAVKLEMVGLMNEVRLHAARIDQLIERLYKMNRDLVSLEGRMMRLAIDCGVTREIFLKQYEDHLLVGNWKSSSKNLSGKGWDKFFERHTTDVEAIRDQIDSIASESGLPLLEYKRIVSTVQKGDKESNRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMMHEIGREPTPEELAVRLHMPLDKVRKVLKIAKEPVSLETPIGDEEDSSLGDFIEDKNAILPVESAIQSNLRETTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDT*