ggKbase home page

cg1_0.2_scaffold_3109_c_27

Organism: CG1_02_FULL_Micrarchaeota_60_51_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 36 / 38 MC: 1
Location: 22641..23261

Top 3 Functional Annotations

Value Algorithm Source
rrp4p; exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=CG_Micra_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 408
  • Evalue 7.60e-111
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 206.0
  • Bit_score: 149
  • Evalue 9.90e-34
exosome complex RNA-binding protein Rrp4 id=5241843 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 206.0
  • Bit_score: 149
  • Evalue 3.50e-33
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_04 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 621
ATGAGGACAATCGTTGTGCCGGGCGAAAAAGTGGCCGACGAGCCCAGGCAGCAGGACGAAGCCTGCTTCGCGGACTCGCACGGCACGTTCGCCTCCGTGGTCAGCCTCGCGGACGAGGGGCGCGTAATCCCGCTGAAGGGGCGCTACCTCCCCATACTGGGCGACTACGTAATCGGAATAATAAAGGAAATGCAGCTCACGGGCTACATCATCGACTTGAACTCGCCTTACGAGGCGCGCCTGAGCGACCGCGACTGCCGAGAGGAATACCGCATCGGCGACGTGATTTCCGCGAAAATCTCCTCGGTGAACGAAGTGCACGACGCGGGAGCCATGGAGCCGCGCGCGTTCCAGGGAGGGGAGCTGCTGGAAGTCGAGCCGGTCAAGGTGCCGCGCATCATCGGGCGCAACGGCAGCATGCTCGCGACCATAAAGGAATACACGGACACCCAGCTGTTCGTGGGCAAGAACGGCCGCATCTATCTGAAGGACGGAAACACCGTGCTCGCCTCGCTGGCGGTGCTCAAGATTTGCAGGGAAGCCCACATTCCGGGCTTGACGGAACGCATGACCGCGTTCCTGCAGGAAGAATCCAAAAAGGTGAAAAAAAATGAAGAGTGA
PROTEIN sequence
Length: 207
MRTIVVPGEKVADEPRQQDEACFADSHGTFASVVSLADEGRVIPLKGRYLPILGDYVIGIIKEMQLTGYIIDLNSPYEARLSDRDCREEYRIGDVISAKISSVNEVHDAGAMEPRAFQGGELLEVEPVKVPRIIGRNGSMLATIKEYTDTQLFVGKNGRIYLKDGNTVLASLAVLKICREAHIPGLTERMTAFLQEESKKVKKNEE*