ggKbase home page

cg1_0.2_scaffold_1237_c_24

Organism: CG1_02_FULL_Comamonadaceae_60_18_curated

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 24644..25213

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 376
  • Evalue 1.70e-101
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 188.0
  • Bit_score: 255
  • Evalue 9.00e-66
Sigma-24 (FecI-like) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T73_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 188.0
  • Bit_score: 257
  • Evalue 1.40e-65
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGGCAACCCCGAAAGAGCTTTCCGATTTTCTGAAGGAAGTTGAAAAACGCGCCTTCAAGCGGGCGCTTTACCACGTGCGTAACGACGAATCTGCGTTTGACATCGTGCAAGACAGCATGATGCGTCTGGCCGAAAACTATGGCGACAAACCGGTGGAAGAACTCCCCCTGCTGTTCCAGCGTATCCTCTCCAACGCCACGATGGACTGGTTTCGCAGGCAAAAAGTACAAAATGCGCTTTTTTCACCGTTTTCTGATTTTCAGTCACAAGACGAGGATGCTGGCGAATTTGACATTCTTGAAGCCATCTCGGTTGCCAACGTGCCACCCGAATTCGACAACCCGCAAAGCAACCACGAGCGGGCGCAGACCCTCAGAGTCATCGAAGATGCCCTGCTAAAGTTGCCACTGCGTCAACGAGAAGCGTTCTTGCTGCGTTACTGGGAAGATATGGGCGTTGCCGAAACCGCCAGCACCATGGGCTGCTCGGAAGGTAGCGTCAAAACCCACTGTTTCAGAGCCATTCAGACCCTAGCCAAAACATTGACCGCCAGAGGAATCAGCTCATGA
PROTEIN sequence
Length: 190
LATPKELSDFLKEVEKRAFKRALYHVRNDESAFDIVQDSMMRLAENYGDKPVEELPLLFQRILSNATMDWFRRQKVQNALFSPFSDFQSQDEDAGEFDILEAISVANVPPEFDNPQSNHERAQTLRVIEDALLKLPLRQREAFLLRYWEDMGVAETASTMGCSEGSVKTHCFRAIQTLAKTLTARGISS*