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cg1_0.2_scaffold_2868_c_33

Organism: CG1_02_FULL_Comamonadaceae_60_18_curated

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 30537..31253

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S43_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 238.0
  • Bit_score: 405
  • Evalue 3.10e-110
  • rbh
sigma 28 (flagella/sporulation); K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 465
  • Evalue 4.70e-128
sigma 28 (flagella/sporulation) similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 238.0
  • Bit_score: 405
  • Evalue 8.80e-111

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Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGTACACCGCCAAGGGGCAGCTCGACCGCAACGCCCTGATCCGCCAATACCAGCCATTGGTGCACAAGCTGGCGCACCACATGATGGTCAAACTGCCGGCCAACGTGGAAGTTGACGACCTGATCCAGGTCGGCATGATCGGCTTGTCCGAGGCGCTGTCGCGGTTTGAGGCCACACAAGGGGTGCAGTTTGAAACCTTTGCCACACAGCGCATCCGAGGCGCCATGATCGACGAGCTGCGCGGCAATGACTGGGCCTCACGCAGCACACGCAAAAGCCAAAAAGAAATCGAGGAATCCATGCGGCGCTTGGAGCACCGCTTGGGGCGCACGCCCAAAGAAAGCGAGATCGCAGCCGACCTGAACCTGAGCCTGACCGAGTACCAAAGCCTGCTGGGCAAGGTGCGTGGCACCCAGTTGGTGTACCTAGAAGACATGAACCGCAACGCCGAAGACGAAGACGGTTTCCTGGACCGTCACCTGGGCGATGCCGAGGCCGACCCGCTGAACCTGTTGCGCAATGAACGTCTGCGTCAGGCACTGGTGCTGGCCATCAAGACGCTGCCAGAGCGCGAGCAGTACATCATGAGCATGTACTACGAACAAGACATGAACCTGAAGGAAATCGCTGCTGTGCTGGATGTAACCGAATCACGCGTGTGCCAGTTGCACAGCCAGTCGATCGCCCGCTTGCGCGCCAAAATGCGCGCGCACTGA
PROTEIN sequence
Length: 239
MYTAKGQLDRNALIRQYQPLVHKLAHHMMVKLPANVEVDDLIQVGMIGLSEALSRFEATQGVQFETFATQRIRGAMIDELRGNDWASRSTRKSQKEIEESMRRLEHRLGRTPKESEIAADLNLSLTEYQSLLGKVRGTQLVYLEDMNRNAEDEDGFLDRHLGDAEADPLNLLRNERLRQALVLAIKTLPEREQYIMSMYYEQDMNLKEIAAVLDVTESRVCQLHSQSIARLRAKMRAH*