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cg1_0.2_scaffold_171_c_35

Organism: CG1_02_FULL_Comamonadaceae_60_18_curated

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(27285..28376)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase RluD (EC:4.2.1.70); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 689
  • Evalue 3.00e-195
pseudouridine synthase RluD (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 345.0
  • Bit_score: 448
  • Evalue 2.40e-123
Pseudouridine synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XQ3_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 345.0
  • Bit_score: 448
  • Evalue 8.40e-123
  • rbh

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Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
TTGTCGATCAACCCGTTGAACAGCACGATTCCAGTGACAAACATTATAGAGGGCAAAGCTCCGGCGGCGTTGCCCACAGCCAGTATTGTCTGTGTGGACGAAGACAGCAGCGGGCAGCGCGTGGACAATTTCTTGATGCGCTTGCTCAAGGGCGTGCCCAAGACACACATCTACCGCGTCATTCGCAGCGGAGAGGTGCGCGTCAACAAAGGCCGGGTTACGGCAGACAGCCGGGTGCAGACGGGCGACCTGGTGCGCGTGCCACCGGTGCGGGTGTCGCAGCGCGCGCAGGACAAACAGCTGGCCATGGCAGGGCAGGCGGCGCGCGTGCCGGCGCGCACCTTCACCGTGTTGCTGGAAGACGAGTACCTGATCGCGCTGGACAAGCCCGCCGGGGTGGCGGTGCACGGTGGCTCGGGGGTGAGCTTTGGTGTGATCGAGCAACTGCGCATGGCGCGGCCACAGGCGCCTTTTCTGGAGCTGGTGCACCGGCTGGACCGCGAAACCAGTGGCATTTTGCTGGTGGCCAAAAAGCGCAGCGCACTGAAAGCGCTGCAAGAGCAATTTCGCCAGCGCCAGACGGGCAAGACTTATCTGGCGATGGTGCGTGGCACCTGGCCTGTCAAGTTGAAGGTGCTGGACAAGCCGCTGCACAAATACCTAGTGGCGAGCGACCAGGCGCAGGCTGGGGAGCGCCGGGTGAAGGTGGTTTCAAAGGACGATCCAGATGGCATGCCTGCACTCACGCTGGTGAAGGTGCGCGCGTCCACGGCAGACTACTCGCTGCTGGAAGTGACCATCAAGACCGGGCGCACGCACCAGATTCGCGTGCACCTGGCCAGCGCGGGGTATCCGATTCTGGGCGACGACAAGTACGGCGACTTTGAGCTCAACAAGGCGCTGGCGCGTGCGCAGCCTGGCTTGCAGCGCATGTTTTTGCACGCCTGGCGGCTGGCGTTGCATCACCCCGCCAGCGGCGAGGGCCTTGAATTGCTGGCAGACTTGGCGCCCGAACTGGCCCGGCTTGCGCAACAGGTGTTTCCTGACGCTTGTACCGGGTTGTCTTCCACCCTTGAGAGCCACCATCCATGA
PROTEIN sequence
Length: 364
LSINPLNSTIPVTNIIEGKAPAALPTASIVCVDEDSSGQRVDNFLMRLLKGVPKTHIYRVIRSGEVRVNKGRVTADSRVQTGDLVRVPPVRVSQRAQDKQLAMAGQAARVPARTFTVLLEDEYLIALDKPAGVAVHGGSGVSFGVIEQLRMARPQAPFLELVHRLDRETSGILLVAKKRSALKALQEQFRQRQTGKTYLAMVRGTWPVKLKVLDKPLHKYLVASDQAQAGERRVKVVSKDDPDGMPALTLVKVRASTADYSLLEVTIKTGRTHQIRVHLASAGYPILGDDKYGDFELNKALARAQPGLQRMFLHAWRLALHHPASGEGLELLADLAPELARLAQQVFPDACTGLSSTLESHHP*