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cg1_0.2_scaffold_11347_c_7

Organism: CG1_02_FULL_Berkelbacteria_42_45_curated

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(5670..6782)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=CG_Berkel_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 370.0
  • Bit_score: 718
  • Evalue 3.60e-204
adg:Adeg_1726 RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor id=86475 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 371.0
  • Bit_score: 494
  • Evalue 8.00e-137
  • rbh
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 359.0
  • Bit_score: 414
  • Evalue 3.90e-113

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Taxonomy

CG_Berkel_01 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGCTAAAAAGGTCCCAAAATTTATTCGCGAGGCACCTCTACCTTTTACGCCGGAGATCAATCGGCTTTTGGAGAAAGGCAAAGCTCATGGCTATGTGACGATGAAGGAGATGCTTCAGGTTTTTCCTTATGCCGAAGAAGACATCGCGACTCTCGATGAGATTTTTGATTATCTCATTTCACACGGCGTTGATGTTCAAGAAGAGGAACAGACGATATCAATTTTAGAAAATATTATCGGCGGCCAGCGGGTGGAAGATGATATTATGGAAGGGCTGGAATCAATTTCTGATGACTCAGTGCGAATGTATTTACGAGAAATTGGCCGAATTTCACTCCTGACTACCGAAGAAGAAGTCCGCTTGGCTAAAAGAATTGAAAAGGGTGACCAGCTGGCAAAACGGCGATTGGCCGAAGCCAACCTGCGTTTGGTAGTTTCGATCGCCAAAAAATATATTGGACACGGACTCTCACTTTTGGATGCTATCCAGGAAGGCAACACTGGTCTGATGCGAGCGGTGGAGAAGTTTGATTACAAAAAGGGTTATAAATTTTCCACCTATGCCACCTGGTGGATCCGTCAAGCGATCACTCGAGCGATCGCCGACCAGGCACGAACAATCCGCATCCCTGTTCATATGATTGAAATGATTAATAAGCTCATTCGCACTCAACGTCAACTGGTCCAAGATCTTGGCCGTGAGCCAACGCCAGAAGAGATTGCTCACGAAATGGGCATTGATGTTGAAAAAGTTGAACATATTATTAAGATTTCTCAAGAGACAGTTTCTTTAGAGTCACCTGTTGGCGAAGAGTCTAATTCAAAACTTGGCGATTTTATTGAGGACGACAAAAATCTTTCGCCTGAAGAAAGCGCAATATACCAGCTTCTCAAAGGAGATGTGAGTAAATTTCTAGGAGTTCTATCACCGCGGGAGCAAAAAGTTTTGAAGATGCGCTTTGGCCTCGAAACCGGCAGGACTCATACTCTGGAGGAAGTTGGCAAAGAATTTGGTGTCACTCGTGAACGCATTCGTCAAATCGAGGCCAAAGCGCTGCAAAAACTAAAAAAGAACGAGCAATCCGAAAGTTTGCATACGTATTTGAAATAG
PROTEIN sequence
Length: 371
MAKKVPKFIREAPLPFTPEINRLLEKGKAHGYVTMKEMLQVFPYAEEDIATLDEIFDYLISHGVDVQEEEQTISILENIIGGQRVEDDIMEGLESISDDSVRMYLREIGRISLLTTEEEVRLAKRIEKGDQLAKRRLAEANLRLVVSIAKKYIGHGLSLLDAIQEGNTGLMRAVEKFDYKKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIEMINKLIRTQRQLVQDLGREPTPEEIAHEMGIDVEKVEHIIKISQETVSLESPVGEESNSKLGDFIEDDKNLSPEESAIYQLLKGDVSKFLGVLSPREQKVLKMRFGLETGRTHTLEEVGKEFGVTRERIRQIEAKALQKLKKNEQSESLHTYLK*