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cg1_0.2_scaffold_2579_c_6

Organism: CG1_02_FULL_Berkelbacteria_42_45_curated

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 3846..4817

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=CG_Berkel_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 323.0
  • Bit_score: 626
  • Evalue 2.10e-176
ribosomal large subunit pseudouridine synthase, RluD subfamily (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 321.0
  • Bit_score: 238
  • Evalue 2.50e-60
Pseudouridine synthase n=1 Tax=Dehalococcoides sp. (strain CBDB1) RepID=Q3ZYT0_DEHSC similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 320.0
  • Bit_score: 238
  • Evalue 9.00e-60
  • rbh

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Taxonomy

CG_Berkel_01 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGGAATTTAAAATTTCCAAAAATGAGGCGGGGGAGAGAGCTGATGTTTTTTTGGCCAAAAAAATTCCCGATATTAGTCGGGCGCAAATTCAGCAAGCAATAAGATCCGGTGTTGTCAAAATAAACAGAAAAAGTATTAAATCATCATACATTCTAAAAATTGGTGATAAAATTACAGTCGAAGATAAATTTCTTGAAAATTTAAATAAGCCGTTAAAATTAAAATCAGAAAAAATACCACTTAAGGTAATTTTCGAGGATGACGATCTTCTAGTTATAGACAAGCCCTCAAGCCTGGTTACTCATCCGGGCGCAGGTAACAAATCTGGTACAGTTGTAAATGCTCTTCTTAATTACATCCCGGAAATTAAAAACGTTGTCCAGGAAAAGACTGACCAATTTTCTCTTCTTCGACCGGGAATTGTCCATCGGCTGGACAAGGATACTTCTGGCCTGATGGTGATCGCCAAAAATCGCCAGACATTATCATTTCTATCAAGCGAGCTGCAAAATAAACAATTCAACAAATATTATTTAGCTCTGGTTTACGGCTGGTTGCCCGAAGGGGGAAAGATCGAAAGTTACTTAGCTCGTGATAAAAAAAATCGCAAAAAGATTATTGAGGTCGAAAAAGAATTTGGCAAAAATGCAATTTCAAATTATAAGGCTCAGAAATATCTAGAGACTAAAGATGGCAAATATCATGTTACATTGGCAGAAATTGAGATCCTAACAGGTAGGACCCACCAAATTAGAGTCCAGATGAAAGGGATCGGTTTCCCTATTTTAGGAGATGCGGCCTATGTTTCCAAAGAGAGTGAACGCTTATCAAGAGAACTAAGCGCAAAAAGACAAATGTTACATGCGGCAAGAATTCGATTTCGGCTGCCGAGTACAAAAAAATATCTGGAATTATCAACATCATTGCCTGAAGATTTTCAGAAAATTCTTGACAAGTTAAAAGAGATCTAA
PROTEIN sequence
Length: 324
MEFKISKNEAGERADVFLAKKIPDISRAQIQQAIRSGVVKINRKSIKSSYILKIGDKITVEDKFLENLNKPLKLKSEKIPLKVIFEDDDLLVIDKPSSLVTHPGAGNKSGTVVNALLNYIPEIKNVVQEKTDQFSLLRPGIVHRLDKDTSGLMVIAKNRQTLSFLSSELQNKQFNKYYLALVYGWLPEGGKIESYLARDKKNRKKIIEVEKEFGKNAISNYKAQKYLETKDGKYHVTLAEIEILTGRTHQIRVQMKGIGFPILGDAAYVSKESERLSRELSAKRQMLHAARIRFRLPSTKKYLELSTSLPEDFQKILDKLKEI*