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cg1_0.2_scaffold_12824_c_9

Organism: Nitrospirae bacterium CG1_02_44_142

near complete RP 48 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 6012..6560

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=planctomycete KSU-1 RepID=I3IKB7_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 192.0
  • Bit_score: 170
  • Evalue 1.70e-39
  • rbh
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Nitrosp_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 363
  • Evalue 1.90e-97
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 180.0
  • Bit_score: 158
  • Evalue 2.40e-36

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Taxonomy

CG_Nitrosp_01 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 549
ATGGATTTTAAAGAACTGATAGAAAAACACCTTGATTCGTTGTGGTTTACAGCGCTCAGACTCACAAAGAATAAGGAGGATGCAGAAGACCTTGTGCAGGAGACAAGCATTAGGGCATATGAAAATATCGGCTCGCTGCGCTCTGAAAACAAGGCAAAGTCATGGCTTTTTAAGATTCTCACCAATACATTTATCAATAAATACAGGAAAAGCAAATCACTGCCTGAGGAAGTTGATGTTGAGCCTGACTTTCTTGAGCCGATTTTCTATAAAAATGGGCATTATTTTGACATGGAGAAGGATATGTTCTCTTGCGTAATGGACGAAGATGTAAAGAACGCAATTGACAGCCTTCCCATTGAGTTTAGAACAGTTGTATTGCTTGTTGATATTGAAGAACTCTCATATAAGGATGTTGAAGACATCCTGAAGATTTCTTCAGGGACGCTTGCATCAAGGCTGTATAGGGGCAGAAGGCTTTTAAGAGACGCCCTGTATGAGTATGCGAAGAGAGAGGGTTTTTTAAAGGAGAAGAAAAATGAAGTGTAA
PROTEIN sequence
Length: 183
MDFKELIEKHLDSLWFTALRLTKNKEDAEDLVQETSIRAYENIGSLRSENKAKSWLFKILTNTFINKYRKSKSLPEEVDVEPDFLEPIFYKNGHYFDMEKDMFSCVMDEDVKNAIDSLPIEFRTVVLLVDIEELSYKDVEDILKISSGTLASRLYRGRRLLRDALYEYAKREGFLKEKKNEV*