ggKbase home page

cg1_0.2_scaffold_613_c_9

Organism: CG1_02_FULL_OD1_Parcubacteria_48_398_curated

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(8964..9314)

Top 3 Functional Annotations

Value Algorithm Source
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=CG_CPR12_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 165
  • Evalue 6.30e-38
50S ribosomal protein L20 id=4731750 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 141
  • Evalue 4.10e-31
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 116.0
  • Bit_score: 129
  • Evalue 7.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_CPR12_01 → CG_CPR12 → Bacteria

Sequences

DNA sequence
Length: 351
ATGCCCCGAGTAAAACGCGGTACTGTCCGCACAAAGAAAAGAAAATCCCTCCTTGCAAAAACCAAAGGCTATAAATGGGGACGTAAAAAATTGGTGCGCGCCGCCAAGACCGCGGTCAAAAAGGCCGGCCAGCACGCGTTGCGCGACCGGCGCAAGAAAAAGCGCACCATGCGCGCGCTGTGGCAGGTGCGCCTGAATGCCGCCGTGCGCGAGGAAGGCATGACCTATTCTACGTTTGTCCATTCTCTGAAAAAATCACATAGCGAACTTGATAGAAAAGTATTAGCAGCTCTCGCTGCCGATGAGCCAACCGTGTTTAAAGCAATTGTTGCAAAAGTGAAAAGCGCATAA
PROTEIN sequence
Length: 117
MPRVKRGTVRTKKRKSLLAKTKGYKWGRKKLVRAAKTAVKKAGQHALRDRRKKKRTMRALWQVRLNAAVREEGMTYSTFVHSLKKSHSELDRKVLAALAADEPTVFKAIVAKVKSA*