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cg_0.2_sub10_scaffold_10_c_13

Organism: CG1_02_SUB10_Hydrogenophilaceae_62_390_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(13123..13749)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Methylotenera RepID=UPI000360F823 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 183.0
  • Bit_score: 202
  • Evalue 4.60e-49
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Hydro_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 435
  • Evalue 4.50e-119
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 184.0
  • Bit_score: 197
  • Evalue 3.20e-48

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Taxonomy

CG_Hydro_01 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGTGGTGCATCCGGGACGAGCGGGCACGTGACCGCAAGGAGACTGAATTGAACAAAAACACGCTAGGCTCGCCCGATACCTGGCTGGATGAGCATGGCGCAGCGCTCTATAAATATGCCCTGATGCATACTCGCGACGAACACAAGGCCGAAGAAGCGGTGCAGGAAACCTTGCTTGCCGCCCTGGAGTCGCGCGACCGATTCGCCGGCGACGCATCGCCGCGCACCTGGCTGATCGGCATTCTCAAGCACAAGGTCATGGATATGTTTCGGCATGACGCGCGCGAGGTGCAATTGGCAGACCCGGATGACGCGGAAGATGCGCAGGTGGAAGACAACTTCGCGGCCAATGGCCATTGGCGCAACATGCCTTCGGATTGGGGCAATCCGGAAGAGCTGCTGGAACGCGGCCAGTTCATGACCATACTGCAACGCTGCCTGGACGCCTTGCCACCTCGATTATCGAAGCTGTTCATGCTGCGCGAGGTAATGGAAGAAGATACGGAAACTATTTGTCAGGATTTGGCGATCACCCCGACCAATCTGTGGACGATGCTGTATCGGGCCCGTTTGGGGCTCCGGCAGTGTCTCGACAGGAATTGGGTCGGTAAAACCGCCCAGGGGTGA
PROTEIN sequence
Length: 209
VWCIRDERARDRKETELNKNTLGSPDTWLDEHGAALYKYALMHTRDEHKAEEAVQETLLAALESRDRFAGDASPRTWLIGILKHKVMDMFRHDAREVQLADPDDAEDAQVEDNFAANGHWRNMPSDWGNPEELLERGQFMTILQRCLDALPPRLSKLFMLREVMEEDTETICQDLAITPTNLWTMLYRARLGLRQCLDRNWVGKTAQG*