ggKbase home page

cg_0.2_sub10_scaffold_73_c_70

Organism: CG1_02_SUB10_Hydrogenophilaceae_62_390_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 60976..61236

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=HFQ_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 76.0
  • Bit_score: 109
  • Evalue 1.70e-21
  • rbh
RNA-binding protein Hfq; K03666 host factor-I protein Tax=CG_Hydro_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 170
  • Evalue 1.10e-39
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 76.0
  • Bit_score: 109
  • Evalue 4.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Hydro_01 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGAACGAACGACAAAACCTTCAGGATGTATTTCTTAACACCCTGAGAAAAGAACACACCACGGTCTCCATCTTTCTGGTGAACGGCATCAAGCTGGTTGGCCGCATTGAATCCTTCGACCAATACATGGTCCTGCTACGAGGCAATGACCAAGCCGTACAAGCCATCTTCAAACATGCCATCTCCACCGTATCCCCGGCGCGACAAGTGACCGTCACGACCCGGCCGGCGCCGCGTGCGCCAAGCCCAAGCGCCGAATGA
PROTEIN sequence
Length: 87
MNERQNLQDVFLNTLRKEHTTVSIFLVNGIKLVGRIESFDQYMVLLRGNDQAVQAIFKHAISTVSPARQVTVTTRPAPRAPSPSAE*