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cg_0.2_sub100_scaffold_105_c_9

Organism: CG1_02_SUB100_Thiomicrospira_44_16_curated

near complete RP 47 / 55 BSCG 47 / 51 ASCG 9 / 38 MC: 1
Location: comp(8969..9238)

Top 3 Functional Annotations

Value Algorithm Source
RNA chaperone Hfq n=1 Tax=Thiomicrospira halophila RepID=UPI00035F9595 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 85.0
  • Bit_score: 157
  • Evalue 5.60e-36
host factor Hfq; K03666 host factor-I protein Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 179
  • Evalue 2.50e-42
host factor Hfq similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 84.0
  • Bit_score: 153
  • Evalue 2.30e-35

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Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGATAATAAAAAGCCTGCAAAGGCATTACCGATTCAAGATCCGTATTTAAATGCGTTGAGAAAAGAGCGGATTAATGTGGCAATTTACTTGGTTAATGGCGTTAAATTACAAGGCAGAGTCGATTCTTTTGACCAGTTTGTGGTTTTATTGCGCAGTAATGTAACGCAAATGGTCTATAAACACGCGATTTCGACCATCGTCCCGGCGAGAGATCCAAAAGCCTATGAGTTTGAAACAGCTCACTCAGATGAGAATGCCGCTGGATAA
PROTEIN sequence
Length: 90
MDNKKPAKALPIQDPYLNALRKERINVAIYLVNGVKLQGRVDSFDQFVVLLRSNVTQMVYKHAISTIVPARDPKAYEFETAHSDENAAG*